About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides50524-
Paelopatides50525TRANSPOSASE, PUTATIVE-RELATED
Paelopatides50526-
Paelopatides50527PTB-CONTAINING, CUBILIN AND LRP1-INTERACTING PROTEIN
Paelopatides50528-
Paelopatides50529-
Paelopatides50530-
Paelopatides50531SUSHI DOMAIN-CONTAINING PROTEIN 1
Paelopatides50532-
Paelopatides50533BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST
Paelopatides50534ELYS PROTEIN
Paelopatides50535-
Paelopatides50536NETRIN RECEPTOR UNC5
Paelopatides50537MONOCARBOXYLATE TRANSPORTER
Paelopatides50538-
Paelopatides50540PHOSPHOLIPID SCRAMBLASE-RELATED
Paelopatides50541-
Paelopatides50542NUCLEAR PORE GLYCOPROTEIN P62-RELATED
Paelopatides50543-
Paelopatides50544FIBRINOGEN/TENASCIN/ANGIOPOEITIN
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