About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides50545-
Paelopatides50546PROTEIN CBG26694
Paelopatides50547-
Paelopatides50548ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides50549INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides50550-
Paelopatides50551ATP7, ISOFORM B
Paelopatides50552-
Paelopatides50553G PROTEIN-COUPLED RECEPTOR 157-RELATED
Paelopatides50554-
Paelopatides50555-
Paelopatides50556-
Paelopatides50557SLR5058 PROTEIN
Paelopatides50558HEPARAN SULFATE 2-O-SULFOTRANSFERASE
Paelopatides50559UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN
Paelopatides50560BASIC HELIX-LOOP-HELIX ZIP TRANSCRIPTION FACTOR
Paelopatides50561PROTEIN CBG26694
Paelopatides50562-
Paelopatides50563-
Paelopatides50564-
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