About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides50779REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides50780-
Paelopatides50781TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides50782EXPRESSED PROTEIN
Paelopatides50783-
Paelopatides50784PROTEIN CBG26694
Paelopatides50785PROTEIN CBG26694
Paelopatides50786PROTEIN CBG26694
Paelopatides50787BONUS, ISOFORM C-RELATED
Paelopatides50788SMALL NUCLEAR RIBONUCLEOPROTEIN F SNRNP-F
Paelopatides50789ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN
Paelopatides50790AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Paelopatides50791L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides50792-
Paelopatides50793F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides50794TESTOSTERONE-REGULATED PROTEIN RP2
Paelopatides50795TESTOSTERONE-REGULATED PROTEIN RP2
Paelopatides50796-
Paelopatides50797-
Paelopatides50798SERINE PROTEASE INHIBITOR, SERPIN
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