About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides50899TUBULIN
Paelopatides50900TUBULIN
Paelopatides50901PROTEIN CBG26694
Paelopatides50902ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides50903REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides50905ENDONUCLEASE-RELATED
Paelopatides50906POL PROTEIN
Paelopatides50907-
Paelopatides50908RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides50909TRANSPOSASE, PUTATIVE-RELATED
Paelopatides50910-
Paelopatides50911-
Paelopatides50912OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED
Paelopatides50913URIDINE DIPHOSPHATE GLUCOSE PYROPHOSPHATASE
Paelopatides50914-
Paelopatides50915AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Paelopatides5091626S PROTEASOME NON-ATPASE REGULATORY SUBUNIT
Paelopatides50917SUGAR KINASE
Paelopatides50918INTRACELLULAR TRAFFIC PROTEIN-RELATED
Paelopatides50919-
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