About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_011978-T1ASPARTATEAMMONIA/ARGININOSUCCINATE/ADENYLOSUCCINATE LYASE
LLU|FUN_011979-T1
LLU|FUN_011980-T1
LLU|FUN_011981-T11-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED
LLU|FUN_011982-T1MRNA EXPORT FACTOR AND BUB3
LLU|FUN_011983-T1ALPHA-GLUCOSIDASE
LLU|FUN_011984-T1UNCHARACTERIZED
LLU|FUN_011985-T1EXPRESSED PROTEIN
LLU|FUN_011986-T1FTP DOMAIN-CONTAINING PROTEIN
LLU|FUN_011987-T1
LLU|FUN_011988-T1FTP DOMAIN-CONTAINING PROTEIN
LLU|FUN_011989-T1
LLU|FUN_011990-T1
LLU|FUN_011991-T1ARSENITE METHYLTRANSFERASE
LLU|FUN_011992-T1
LLU|FUN_011993-T1ZINC FINGER PROTEIN
LLU|FUN_011994-T1KRAB DOMAIN C2H2 ZINC FINGER
LLU|FUN_011995-T1ZINC FINGER AND SCAN DOMAIN-CONTAINING
LLU|FUN_011996-T1
LLU|FUN_011997-T1
LLU|FUN_011998-T1
LLU|FUN_011999-T1
LLU|FUN_012000-T1
LLU|FUN_012001-T1INTERFERON-INDUCED PROTEIN 35/NMI N-MYC/STAT INTERACTING PROTEIN
LLU|FUN_012002-T1
LLU|FUN_012003-T1
LLU|FUN_012004-T1BONUS, ISOFORM C-RELATED
LLU|FUN_012005-T1
LLU|FUN_012006-T1
LLU|FUN_012007-T1
LLU|FUN_012008-T1
LLU|FUN_012009-T1CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR
LLU|FUN_012010-T1
LLU|FUN_012011-T1
LLU|FUN_012012-T1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
LLU|FUN_012013-T1
LLU|FUN_012014-T1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
LLU|FUN_012015-T1ACROSIN-RELATED
LLU|FUN_012016-T1CHYMOTRYPSIN-RELATED
LLU|FUN_012017-T1ACROSIN-RELATED
LLU|FUN_012018-T1TRANSMEMBRANE PROTEASE SERINE
LLU|FUN_012019-T1
LLU|FUN_012020-T1
LLU|FUN_012021-T1
LLU|FUN_012022-T1CRAMPED PROTEIN
LLU|FUN_012023-T1PAXIP1-ASSOCIATED GLUTAMATE-RICH PROTEIN 1
LLU|FUN_012024-T1NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B14.5B
LLU|FUN_012025-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 169
LLU|FUN_012026-T1
LLU|FUN_012027-T1
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