Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8008770.1 | IMPORTIN ALPHA |
| CAI8008769.1 | IMPORTIN ALPHA |
| CAI8008773.1 | IMPORTIN ALPHA |
| CAI8008774.1 | IMPORTIN ALPHA |
| CAI8008775.1 | |
| CAI8008776.1 | TRANSMEMBRANE 9 SUPERFAMILY PROTEIN |
| CAI8008777.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8008779.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8008780.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8008781.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8008783.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8008784.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8008778.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8008782.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8008785.1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| CAI8008786.1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| CAI8008787.1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| CAI8008788.1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| CAI8008789.1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| CAI8008790.1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| CAI8008791.1 | PEROXISOMAL MEMBRANE PROTEIN PEX14 |
| CAI8008792.1 | PEROXISOMAL MEMBRANE PROTEIN PEX14 |
| CAI8008794.1 | E3 UBIQUITIN-PROTEIN LIGASE HECTD3 |
| CAI8008793.1 | E3 UBIQUITIN-PROTEIN LIGASE HECTD3 |
| CAI8008795.1 | |
| CAI8008796.1 | |
| CAI8008797.1 | ATP-BINDING CASSETTE SUB-FAMILY B |
| CAI8008798.1 | ATP-BINDING CASSETTE SUB-FAMILY B |
| CAI8008799.1 | ATP/GTP PHOSPHATASE |
| CAI8008800.1 | GAMMA-GLUTAMYLTRANSPEPTIDASE (AFU_ORTHOLOGUE AFUA_4G13580) |
| CAI8008801.1 | TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT IS1111A |
| CAI8008802.1 | BETA-GALACTOSIDASE |
| CAI8008803.1 | FUMARYLACETOACETATE HYDROLASE DOMAIN-CONTAINING PROTEIN 2A-RELATED |
| CAI8008804.1 | D-AMINOPEPTIDASE |
| CAI8008805.1 | |
| CAI8008806.1 | |
| CAI8008807.1 | |
| CAI8008809.1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
| CAI8008808.1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
| CAI8008810.1 | KINASE D-INTERACTING SUBSTRATE OF 220 KDA |
| CAI8008811.1 | SOLUTE CARRIER FAMILY 34 SODIUM PHOSPHATE , MEMBER 2-RELATED |
| CAI8008812.1 | |
| CAI8008813.1 | QUINOPROTEIN ALCOHOL DEHYDROGENASE (CYTOCHROME C) |
| CAI8008814.1 | PYRUVATE KINASE |
| CAI8008815.1 | REGULATOR OF RPOS |
| CAI8008816.1 | PHOSPHATE TRANSPORT SYSTEM PERMEASE PROTEIN |
| CAI8008817.1 | PHOSPHATE TRANSPORT SYSTEM PERMEASE PROTEIN PSTA-RELATED |
| CAI8008818.1 | ABC TRANSPORTER I FAMILY MEMBER 17 |
| CAI8008819.1 | PHOSPHATE-SPECIFIC TRANSPORT SYSTEM ACCESSORY PROTEIN PHOU |
| CAI8008820.1 | HYDROXYACYLGLUTATHIONE HYDROLASE GLOC |
