Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8008521.1 | |
| CAI8008522.1 | PEPTIDASE C45 |
| CAI8008523.1 | PEPTIDASE C45 |
| CAI8008524.1 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| CAI8008527.1 | ANION EXCHANGE PROTEIN |
| CAI8008526.1 | ANION EXCHANGE PROTEIN |
| CAI8008525.1 | ANION EXCHANGE PROTEIN |
| CAI8008528.1 | |
| CAI8008530.1 | |
| CAI8008529.1 | |
| CAI8008531.1 | |
| CAI8008532.1 | BCDNA.GH03377 |
| CAI8008533.1 | |
| CAI8008534.1 | H REPEAT-ASSOCIATED PREDICTED TRANSPOSASE |
| CAI8008535.1 | |
| CAI8008536.1 | INOSINE TRIPHOSPHATE PYROPHOSPHATASE/HAM1 PROTEIN |
| CAI8008537.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
| CAI8008538.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8008539.1 | - |
| CAI8008540.1 | HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER |
| CAI8008541.1 | |
| CAI8008542.1 | RIBONUCLEASE Y |
| CAI8008543.1 | 2',3'-CYCLIC-NUCLEOTIDE 2'-PHOSPHODIESTERASE |
| CAI8008544.1 | EXONUCLEASE |
| CAI8008545.1 | INNER MEMBRANE PROTEIN YGIH |
| CAI8008546.1 | RECA |
| CAI8008547.1 | GLYCOPROTEIN HORMONE RECEPTOR |
| CAI8008548.1 | GLYCOPROTEIN HORMONE RECEPTOR |
| CAI8008549.1 | GLYCOPROTEIN HORMONE RECEPTOR |
| CAI8008550.1 | 5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE-RELATED |
| CAI8008552.1 | GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE |
| CAI8008553.1 | GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE |
| CAI8008551.1 | GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE |
| CAI8008554.1 | GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE |
| CAI8008555.1 | 2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA |
| CAI8008556.1 | BLR7761 PROTEIN |
| CAI8008557.1 | LIPOPROTEIN-RELATED |
| CAI8008558.1 | |
| CAI8008559.1 | XANTHINE DEHYDROGENASE |
| CAI8008560.1 | |
| CAI8008561.1 | |
| CAI8008562.1 | |
| CAI8008563.1 | |
| CAI8008564.1 | |
| CAI8008566.1 | |
| CAI8008565.1 | |
| CAI8008567.1 | |
| CAI8008568.1 | |
| CAI8008569.1 | PROLYL ENDOPEPTIDASE |
| CAI8008570.1 | CENTROSOMAL PROTEIN 2 |
