About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 216 217 218 219 220 221 222 223 224 225 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_011914-T1
OS493_011915-T1
OS493_011916-T1GLPR-RELATED TRANSCRIPTIONAL REPRESSOR
OS493_011917-T1DACTYLIN
OS493_011918-T1RAS-RELATED PROTEIN RAB
OS493_011919-T1HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN
OS493_011920-T1E3 UBIQUITIN-PROTEIN LIGASE TM129
OS493_011921-T1RAB9 EFFECTOR PROTEIN WITH KELCH MOTIFS
OS493_011922-T1TEL2 INTERACTING PROTEIN 1 TTI1 FAMILY MEMBER
OS493_011923-T1TEL2 INTERACTING PROTEIN 1 TTI1 FAMILY MEMBER
OS493_011924-T1RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED
OS493_011925-T1CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED
OS493_011926-T1CILIA AND FLAGELLA-ASSOCIATED PROTEIN 58-RELATED
OS493_011927-T1FRUCTOSE-1-PHOSPHATE PHOSPHATASE
OS493_011928-T1FRUCTOSE-1-PHOSPHATE PHOSPHATASE
OS493_011929-T1
OS493_011930-T1HEAVYWEIGHT, ISOFORM A
OS493_011931-T1
OS493_011932-T1
OS493_011933-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 125
OS493_011934-T1
OS493_011935-T1
OS493_011936-T1
OS493_011937-T1HECT DOMAIN UBIQUITIN-PROTEIN LIGASE
OS493_011938-T1UBIQUITIN-PROTEIN LIGASE E3C
OS493_011939-T1CHARGED MULTIVESICULAR BODY PROTEIN
OS493_011940-T1ASPARTATE AMINOTRANSFERASE
OS493_011941-T1ASPARTATE AMINOTRANSFERASE
OS493_011942-T1
OS493_011943-T1
OS493_011944-T1
OS493_011945-T1
OS493_011946-T1
OS493_011947-T1
OS493_011948-T1UNCHARACTERIZED
OS493_011949-T1INNER CENTROMERE PROTEIN
OS493_011950-T1DIACYLGLYCEROL LIPASE HOMOLOG-RELATED
OS493_011951-T1
OS493_011952-T1LEUCOKININ RECEPTOR-RELATED
OS493_011953-T1LEUCOKININ RECEPTOR-RELATED
OS493_011955-T1B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
OS493_011956-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_011957-T1LEUCOKININ RECEPTOR-RELATED
OS493_011958-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_011959-T1
OS493_011960-T1
OS493_011961-T1NADH-UBIQUINONE OXIDOREDUCTASE ASHI SUBUNIT
OS493_011962-T1DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN
OS493_011963-T1DYNEIN HEAVY CHAIN
OS493_011964-T1DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN
TOP