About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 213 214 215 216 217 218 219 220 221 222 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_011752-T1CYSTEINE-RICH SECRETORY PROTEIN-RELATED
OS493_011753-T1CYSTEINE-RICH SECRETORY PROTEIN-RELATED
OS493_011754-T1DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
OS493_011755-T1
OS493_011759-T1HIGH MOBILITY GROUP PROTEIN 2
OS493_011760-T1
OS493_011761-T1
OS493_011762-T1
OS493_011763-T1
OS493_011764-T1
OS493_011765-T1
OS493_011766-T1
OS493_011768-T1MACPF DOMAIN-CONTAINING PROTEIN
OS493_011769-T1MACPF DOMAIN-CONTAINING PROTEIN
OS493_011770-T1MACPF DOMAIN-CONTAINING PROTEIN
OS493_011771-T1MULTI-COPPER OXIDASE
OS493_011772-T1CARBOHYDRATE SULFOTRANSFERASE
OS493_011773-T1LEUCINE-ZIPPER-LIKE TRANSCRIPTIONAL REGULATOR 1
OS493_011774-T1
OS493_011775-T1PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN
OS493_011776-T1UNCHARACTERIZED
OS493_011777-T1UNCHARACTERIZED
OS493_011778-T1UNCHARACTERIZED
OS493_011779-T1
OS493_011780-T1UNC-13-4A, ISOFORM B
OS493_011781-T1
OS493_011782-T1
OS493_011783-T1PARKIN COREGULATED GENE PROTEIN PARK2 COREGULATED
OS493_011784-T1
OS493_011785-T1
OS493_011786-T1G PROTEIN-COUPLED RECEPTOR 157-RELATED
OS493_011787-T1G PROTEIN-COUPLED RECEPTOR 157-RELATED
OS493_011788-T1TETRATRICOPEPTIDE REPEAT PROTEIN 1
OS493_011789-T1
OS493_011790-T1FIBROBLAST GROWTH FACTOR RECEPTOR
OS493_011791-T1
OS493_011792-T1SPROUTY
OS493_011793-T1FIBROBLAST GROWTH FACTOR
OS493_011794-T1FIBROBLAST GROWTH FACTOR
OS493_011795-T1FIBROBLAST GROWTH FACTOR
OS493_011796-T1SPROUTY
OS493_011798-T1
OS493_011800-T1
OS493_011801-T1ADP-RIBOSYLGLYCOHYDROLASE
OS493_011802-T1FIBROBLAST GROWTH FACTOR RECEPTOR
OS493_011803-T1FIBROBLAST GROWTH FACTOR RECEPTOR
OS493_011804-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_011805-T1CONTACTIN 5
OS493_011806-T1
OS493_011807-T1FIBROBLAST GROWTH FACTOR RECEPTOR
TOP