About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 214 215 216 217 218 219 220 221 222 223 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_011808-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_011809-T1
OS493_011810-T1
OS493_011811-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_011812-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_011813-T15'-NUCLEOTIDASE DOMAIN-CONTAINING
OS493_011814-T1ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 9-RELATED
OS493_011815-T1
OS493_011816-T1
OS493_011817-T1
OS493_011819-T1
OS493_011821-T1PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1
OS493_011822-T1DYNACTIN 1-RELATED MICROTUBULE-BINDING
OS493_011823-T1UNCHARACTERIZED
OS493_011824-T1SUCCINYL-COA LIGASE SUBUNIT ALPHA
OS493_011825-T1
OS493_011826-T1TUMOR SUPPRESSOR P53-BINDING PROTEIN 1
OS493_011827-T1OPSIN
OS493_011828-T1MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 24
OS493_011829-T1MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 24
OS493_011830-T1LD33804P
OS493_011831-T1
OS493_011833-T1KRUEPPEL-LIKE TRANSCRIPTION FACTOR
OS493_011834-T1E3 UBIQUITIN-PROTEIN LIGASE RNF103
OS493_011835-T1PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN
OS493_011836-T1
OS493_011837-T1HUNTINGTON DISEASE PROTEIN
OS493_011838-T1HUNTINGTON DISEASE PROTEIN
OS493_011839-T1HUNTINGTON DISEASE PROTEIN
OS493_011840-T1
OS493_011841-T1HUNTINGTON DISEASE PROTEIN
OS493_011843-T1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
OS493_011844-T1
OS493_011845-T1
OS493_011846-T1PENTRAXIN
OS493_011847-T1PENTRAXIN
OS493_011848-T1
OS493_011849-T1
OS493_011850-T1PENTRAXIN
OS493_011851-T1PENTRAXIN
OS493_011852-T1PENTRAXIN
OS493_011853-T1PENTRAXIN
OS493_011854-T1
OS493_011855-T1
OS493_011856-T1
OS493_011857-T1
OS493_011858-T1DNA2/NAM7 HELICASE FAMILY
OS493_011859-T1
OS493_011860-T1
OS493_011861-T1
TOP