About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_011431-T1
OS493_011432-T1
OS493_011433-T1LITHOSTATHINE
OS493_011434-T1
OS493_011435-T1
OS493_011436-T1
OS493_011437-T1UNCHARACTERIZED
OS493_011438-T1DEATH DOMAIN-CONTAINING PROTEIN CRADD
OS493_011439-T1DEATH DOMAIN-CONTAINING PROTEIN CRADD
OS493_011440-T1FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
OS493_011441-T1DEATH DOMAIN-CONTAINING PROTEIN CRADD
OS493_011442-T1
OS493_011443-T1
OS493_011444-T1
OS493_011445-T1OS05G0345500 PROTEIN
OS493_011446-T1
OS493_011447-T1OS05G0345500 PROTEIN
OS493_011448-T1DEATH DOMAIN-CONTAINING PROTEIN CRADD
OS493_011450-T1POLYAMINE-MODULATED FACTOR 1-BINDING PROTEIN 1-RELATED
OS493_011451-T1
OS493_011452-T1
OS493_011453-T1
OS493_011454-T1
OS493_011455-T1C2H2-TYPE DOMAIN-CONTAINING PROTEIN
OS493_011456-T1
OS493_011457-T1INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN
OS493_011458-T1
OS493_011460-T1
OS493_011461-T1
OS493_011462-T1
OS493_011463-T1
OS493_011464-T1
OS493_011465-T1
OS493_011466-T1
OS493_011467-T1INTEGRAL TRANSMEMBRANE PROTEIN 2
OS493_011468-T1EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 10
OS493_011469-T1HISTONE-LYSINE N-METHYLTRANSFERASE SUV39H
OS493_011471-T1
OS493_011472-T1
OS493_011473-T1
OS493_011474-T1
OS493_011475-T1
OS493_011476-T1
OS493_011477-T1
OS493_011478-T1
OS493_011479-T1
OS493_011480-T1RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
OS493_011481-T1RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
OS493_011482-T1
OS493_011483-T1
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