About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_011172-T1PHOSPHATIDYLINOSITOL SYNTHASE
OS493_011174-T1
OS493_011175-T1PLACENTAL PROTEIN 11-RELATED
OS493_011176-T1ETHANOLAMINEPHOSPHOTRANSFERASE
OS493_011177-T1BETA TRANSDUCIN-RELATED PROTEIN
OS493_011178-T1BETA TRANSDUCIN-RELATED PROTEIN
OS493_011179-T1WD40 REPEAT PROTEIN
OS493_011180-T1COATOMER
OS493_011181-T1METHYLTRANSF_11 DOMAIN-CONTAINING PROTEIN
OS493_011182-T1PLACENTAL PROTEIN 11-RELATED
OS493_011183-T1
OS493_011184-T1CHONDROITIN SYNTHASE
OS493_011185-T1CYCLASE-LIKE PROTEIN 2
OS493_011186-T1CYCLASE-LIKE PROTEIN 2
OS493_011187-T1CYCLASE-LIKE PROTEIN 2
OS493_011188-T1CYCLASE-LIKE PROTEIN 2
OS493_011189-T1PLACENTAL PROTEIN 11-RELATED
OS493_011190-T1APOPTOSIS-INDUCING FACTOR 1
OS493_011191-T1APOPTOSIS-INDUCING FACTOR 1
OS493_011192-T1
OS493_011193-T1
OS493_011194-T1
OS493_011195-T1
OS493_011196-T1
OS493_011197-T1
OS493_011198-T1
OS493_011199-T1
OS493_011200-T1
OS493_011201-T1
OS493_011202-T1EPH RECEPTOR A5
OS493_011203-T1ENDOGLIN/TGF-BETA RECEPTOR TYPE III
OS493_011204-T1
OS493_011205-T1
OS493_011206-T1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
OS493_011207-T1
OS493_011208-T1
OS493_011209-T1
OS493_011210-T1
OS493_011211-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_011212-T1
OS493_011213-T1
OS493_011214-T1
OS493_011215-T1
OS493_011216-T1CONTACTIN 5
OS493_011217-T1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
OS493_011218-T1IQ DOMAIN-CONTAINING PROTEIN D
OS493_011219-T1IQ DOMAIN-CONTAINING PROTEIN D
OS493_011220-T1
OS493_011222-T1
OS493_011224-T1CONTACTIN 5
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