About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 205 206 207 208 209 210 211 212 213 214 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_011327-T1TTC17 PROTEIN
OS493_011328-T1TTC17 PROTEIN
OS493_011329-T1LIPASE MATURATION FACTOR
OS493_011330-T1LIPASE MATURATION FACTOR
OS493_011331-T1LIPASE MATURATION FACTOR
OS493_011332-T1CONDENSIN-2 COMPLEX SUBUNIT H2
OS493_011333-T1
OS493_011334-T1ARL14 EFFECTOR PROTEIN
OS493_011335-T140S RIBOSOMAL PROTEIN S10
OS493_011336-T1WD REPEAT-CONTAINING PROTEIN 55
OS493_011337-T1
OS493_011338-T1APOPTOTIC PROTEASE-ACTIVATING FACTOR 1
OS493_011339-T1APOPTOTIC PROTEASE-ACTIVATING FACTOR 1
OS493_011340-T1
OS493_011341-T1PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1
OS493_011342-T1BETA-ELIMINATING LYASE-LIKE PROTEIN-RELATED
OS493_011343-T1BETA-ELIMINATING LYASE-LIKE PROTEIN-RELATED
OS493_011344-T1BETA-ELIMINATING LYASE-LIKE PROTEIN-RELATED
OS493_011345-T1GROWTH HORMONE-INDUCIBLE SOLUBLE PROTEIN-RELATED
OS493_011346-T1THYMIDYLATE SYNTHASE 1
OS493_011347-T1
OS493_011348-T1
OS493_011349-T1
OS493_011350-T1CYTOCHROME P450 FAMILY 4
OS493_011351-T1
OS493_011352-T1TNF RECEPTOR ASSOCIATED FACTOR
OS493_011353-T1TNF RECEPTOR ASSOCIATED FACTOR
OS493_011354-T1TETRASPANIN
OS493_011355-T1CHONDROITIN SYNTHASE
OS493_011356-T1
OS493_011357-T1CENTROSOMAL PROTEIN 2
OS493_011358-T1
OS493_011359-T1ANION EXCHANGE PROTEIN
OS493_011360-T1LEUCINE RICH REPEAT FAMILY PROTEIN
OS493_011361-T1LEUCINE RICH REPEAT FAMILY PROTEIN
OS493_011362-T1
OS493_011363-T1ADIPOR/PROGESTIN RECEPTOR-RELATED
OS493_011364-T1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
OS493_011365-T1VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 27
OS493_011366-T1MYOTUBULARIN-RELATED
OS493_011367-T1MEVALONATE KINASE/GALACTOKINASE
OS493_011368-T1MEVALONATE KINASE/GALACTOKINASE
OS493_011369-T1LD11652P
OS493_011370-T1RRP15-LIKE PROTEIN
OS493_011371-T1GH04784P
OS493_011372-T1GH04784P
OS493_011373-T1
OS493_011374-T1TETRASPANIN
OS493_011375-T1
OS493_011376-T1CHONDROITIN SYNTHASE
TOP