About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_011377-T1
OS493_011378-T1
OS493_011379-T1LEUCOKININ RECEPTOR-RELATED
OS493_011380-T1CIRCADIAN LOCOMOTER OUTPUT CYCLES PROTEIN KAPUT
OS493_011381-T1
OS493_011382-T1TETRASPANIN
OS493_011383-T1GH11727P
OS493_011384-T1GLYCOSYLTRANSFERASE-RELATED
OS493_011385-T1
OS493_011386-T1
OS493_011387-T1
OS493_011388-T1
OS493_011389-T1
OS493_011390-T1
OS493_011391-T1OS05G0345500 PROTEIN
OS493_011392-T1
OS493_011393-T1
OS493_011394-T1
OS493_011396-T1DEATH DOMAIN-CONTAINING PROTEIN CRADD
OS493_011397-T1OS05G0345500 PROTEIN
OS493_011398-T1
OS493_011399-T1
OS493_011400-T1POLYAMINE-MODULATED FACTOR 1-BINDING PROTEIN 1-RELATED
OS493_011401-T1DEATH DOMAIN-CONTAINING PROTEIN CRADD
OS493_011402-T1
OS493_011403-T1
OS493_011404-T1C2H2-TYPE DOMAIN-CONTAINING PROTEIN
OS493_011405-T1OS05G0345500 PROTEIN
OS493_011406-T1
OS493_011408-T1
OS493_011409-T1SPERM-ASSOCIATED ANTIGEN 6 ARMADILLO REPEAT-CONTAINING
OS493_011410-T1SPERM-ASSOCIATED ANTIGEN 6 ARMADILLO REPEAT-CONTAINING
OS493_011411-T1
OS493_011412-T1
OS493_011414-T1
OS493_011416-T1DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT
OS493_011417-T1DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT
OS493_011418-T1DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT
OS493_011419-T1BOULE-RELATED
OS493_011420-T1PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE
OS493_011421-T1INSULIN-INDUCED GENE 1
OS493_011422-T1MUCOSA ASSOCIATED LYMPHOID TISSUE LYMPHOMA TRANSLOCATION PROTEIN 1/PARACASPASE
OS493_011423-T1RHO/RAC/CDC GTPASE-ACTIVATING PROTEIN
OS493_011424-T1RHO/RAC/CDC GTPASE-ACTIVATING PROTEIN
OS493_011425-T1RHO/RAC/CDC GTPASE-ACTIVATING PROTEIN
OS493_011426-T1SPERM-ASSOCIATED ANTIGEN 6 ARMADILLO REPEAT-CONTAINING
OS493_011427-T1SPERM-ASSOCIATED ANTIGEN 6 ARMADILLO REPEAT-CONTAINING
OS493_011428-T1SPERM-ASSOCIATED ANTIGEN 6 ARMADILLO REPEAT-CONTAINING
OS493_011429-T1METHYLTRANSFERASE
OS493_011430-T1LITHOSTATHINE
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