Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8008073.1 | GLUTAMINASE A-RELATED |
| CAI8008076.1 | GLUTAMINASE A-RELATED |
| CAI8008075.1 | GLUTAMINASE A-RELATED |
| CAI8008070.1 | GLUTAMINASE A-RELATED |
| CAI8008069.1 | GLUTAMINASE A-RELATED |
| CAI8008072.1 | GLUTAMINASE A-RELATED |
| CAI8008077.1 | GLUTAMINASE A-RELATED |
| CAI8008078.1 | GLUTAMINASE A-RELATED |
| CAI8008079.1 | ATP-DEPENDENT RNA HELICASE DBP3 |
| CAI8008081.1 | ATP-DEPENDENT RNA HELICASE DBP3 |
| CAI8008080.1 | ATP-DEPENDENT RNA HELICASE DBP3 |
| CAI8008083.1 | |
| CAI8008082.1 | ATP-DEPENDENT RNA HELICASE DBP3 |
| CAI8008087.1 | FAS-ASSOCIATED PROTEIN |
| CAI8008086.1 | FAS-ASSOCIATED PROTEIN |
| CAI8008084.1 | FAS-ASSOCIATED PROTEIN |
| CAI8008085.1 | FAS-ASSOCIATED PROTEIN |
| CAI8008089.1 | FAS-ASSOCIATED PROTEIN |
| CAI8008088.1 | FAS-ASSOCIATED PROTEIN |
| CAI8008090.1 | FAS-ASSOCIATED PROTEIN |
| CAI8008091.1 | |
| CAI8008092.1 | |
| CAI8008093.1 | |
| CAI8008102.1 | PEPTIDASE S8 |
| CAI8008101.1 | PEPTIDASE S8 |
| CAI8008100.1 | PEPTIDASE S8 |
| CAI8008099.1 | |
| CAI8008098.1 | |
| CAI8008097.1 | |
| CAI8008096.1 | |
| CAI8008095.1 | |
| CAI8008094.1 | |
| CAI8008104.1 | PEPTIDASE S8 |
| CAI8008103.1 | |
| CAI8008105.1 | |
| CAI8008106.1 | |
| CAI8008107.1 | PEPTIDASE S8 |
| CAI8008108.1 | PEPTIDASE S8 |
| CAI8008109.1 | |
| CAI8008110.1 | |
| CAI8008111.1 | |
| CAI8008112.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8008113.1 | |
| CAI8008114.1 | |
| CAI8008115.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8008118.1 | PERIODIC TRYPTOPHAN PROTEIN 1 |
| CAI8008117.1 | PERIODIC TRYPTOPHAN PROTEIN 1 |
| CAI8008119.1 | PERIODIC TRYPTOPHAN PROTEIN 1 |
| CAI8008120.1 | PERIODIC TRYPTOPHAN PROTEIN 1 |
| CAI8008121.1 | PERIODIC TRYPTOPHAN PROTEIN 1 |
