Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8007921.1 | PTHR43509 |
| CAI8007922.1 | PTHR43509 |
| CAI8007923.1 | ADENYLYLSULFATE REDUCTASE, BETA SUBUNIT |
| CAI8007924.1 | |
| CAI8007925.1 | GH17980P-RELATED |
| CAI8007926.1 | METHYLMALONYL-COA EPIMERASE |
| CAI8007927.1 | HYDRANTOINASE/DIHYDROPYRIMIDINASE FAMILY MEMBER |
| CAI8007932.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8007933.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8007931.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8007928.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8007930.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8007929.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8007934.1 | |
| CAI8007935.1 | DYNACTIN 1-RELATED MICROTUBULE-BINDING |
| CAI8007936.1 | DEDICATOR OF CYTOKINESIS DOCK |
| CAI8007937.1 | DEDICATOR OF CYTOKINESIS DOCK |
| CAI8007938.1 | DEDICATOR OF CYTOKINESIS DOCK |
| CAI8007939.1 | DEDICATOR OF CYTOKINESIS DOCK |
| CAI8007940.1 | DEDICATOR OF CYTOKINESIS DOCK |
| CAI8007941.1 | DEDICATOR OF CYTOKINESIS DOCK |
| CAI8007942.1 | DEDICATOR OF CYTOKINESIS DOCK |
| CAI8007943.1 | DEDICATOR OF CYTOKINESIS DOCK |
| CAI8007944.1 | CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE |
| CAI8007945.1 | CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE |
| CAI8007946.1 | CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE |
| CAI8007948.1 | TARGET OF RAPAMYCIN COMPLEX 2 SUBUNIT BIT61-RELATED |
| CAI8007947.1 | TARGET OF RAPAMYCIN COMPLEX 2 SUBUNIT BIT61-RELATED |
| CAI8007953.1 | UNCHARACTERIZED |
| CAI8007951.1 | ZINC FINGER, ZZ TYPE |
| CAI8007950.1 | UNCHARACTERIZED |
| CAI8007949.1 | UNCHARACTERIZED |
| CAI8007952.1 | ZINC FINGER, ZZ TYPE |
| CAI8007954.1 | ZINC FINGER, ZZ TYPE |
| CAI8007956.1 | |
| CAI8007955.1 | |
| CAI8007958.1 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| CAI8007957.1 | |
| CAI8007959.1 | |
| CAI8007960.1 | EPOXYQUEUOSINE REDUCTASE |
| CAI8007961.1 | EPOXYQUEUOSINE REDUCTASE |
| CAI8007962.1 | |
| CAI8007963.1 | |
| CAI8007964.1 | AQUAPORIN OR AQUAGLYCEROPORIN RELATED |
| CAI8007965.1 | REGULATOR OF RPOS |
| CAI8007966.1 | |
| CAI8007967.1 | HYDRANTOINASE/DIHYDROPYRIMIDINASE FAMILY MEMBER |
| CAI8007968.1 | HYDRANTOINASE/DIHYDROPYRIMIDINASE FAMILY MEMBER |
| CAI8007969.1 | RIBONUCLEASE VAPC2 |
| CAI8007970.1 |
