Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8007821.1 | GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE |
| CAI8007822.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8007823.1 | ALLANTOINASE |
| CAI8007824.1 | ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL |
| CAI8007825.1 | BIFUNCTIONAL PROTEIN PYRR |
| CAI8007826.1 | |
| CAI8007827.1 | SPERMIDINE N(1)-ACETYLTRANSFERASE |
| CAI8007828.1 | |
| CAI8007829.1 | |
| CAI8007830.1 | - |
| CAI8007831.1 | DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 1 |
| CAI8007832.1 | |
| CAI8007834.1 | L-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIAL |
| CAI8007833.1 | L-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIAL |
| CAI8007835.1 | ALANYL-TRNA EDITING PROTEIN |
| CAI8007836.1 | |
| CAI8007837.1 | AMINOMETHYLTRANSFERASE |
| CAI8007838.1 | AMINOMETHYLTRANSFERASE |
| CAI8007839.1 | IRON-SULFUR CLUSTER-BINDING PROTEIN-RELATED |
| CAI8007840.1 | AMINOMETHYLTRANSFERASE |
| CAI8007841.1 | AMINOMETHYLTRANSFERASE |
| CAI8007842.1 | DIAMINOPIMELATE DECARBOXYLASE |
| CAI8007843.1 | DIAMINOPIMELATE DECARBOXYLASE |
| CAI8007844.1 | DIAMINOPIMELATE DECARBOXYLASE |
| CAI8007845.1 | FATTY-ACID AMIDE HYDROLASE |
| CAI8007846.1 | FATTY-ACID AMIDE HYDROLASE |
| CAI8007847.1 | FATTY-ACID AMIDE HYDROLASE |
| CAI8007848.1 | FATTY-ACID AMIDE HYDROLASE |
| CAI8007849.1 | |
| CAI8007850.1 | ALKANESULFONATE MONOOXYGENASE |
| CAI8007851.1 | LUCIFERASE-LIKE MONOOXYGENASE |
| CAI8007852.1 | |
| CAI8007853.1 | ADENINE PHOSPHORIBOSYLTRANSFERASE |
| CAI8007854.1 | |
| CAI8007855.1 | |
| CAI8007856.1 | |
| CAI8007857.1 | TRANSPORT ATP-BINDING PROTEIN |
| CAI8007858.1 | XANTHINE DEHYDROGENASE |
| CAI8007859.1 | FUMARYLACETOACETATE HYDROLASE DOMAIN-CONTAINING PROTEIN 2A-RELATED |
| CAI8007860.1 | PERIPLASMIC BINDING COMPONENT OF ABC TRANSPORTER |
| CAI8007861.1 | DIPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN DPPB-RELATED |
| CAI8007862.1 | OLIGOPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN APPC |
| CAI8007864.1 | FUMARYLACETOACETATE HYDROLASE DOMAIN-CONTAINING PROTEIN 2A-RELATED |
| CAI8007863.1 | FUMARYLACETOACETATE HYDROLASE DOMAIN-CONTAINING PROTEIN 2A-RELATED |
| CAI8007865.1 | PROTEIN NRFC |
| CAI8007866.1 | ALCOHOL DEHYDROGENASE |
| CAI8007867.1 | TRANSCRIPTION ELONGATION FACTOR GREA |
| CAI8007868.1 | |
| CAI8007869.1 | |
| CAI8007870.1 | D-LACTATE DEHYDROGENASE |
