About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50%31,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

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Gene IDDescription
CAI8007572.1RING FINGER PROTEIN-RELATED
CAI8007569.1RING FINGER PROTEIN-RELATED
CAI8007575.1IMPORTIN-7, 8, 11
CAI8007577.1IMPORTIN-7, 8, 11
CAI8007576.1IMPORTIN-7, 8, 11
CAI8007574.1IMPORTIN-7, 8, 11
CAI8007573.1IMPORTIN-7, 8, 11
CAI8007578.1IMPORTIN-7, 8, 11
CAI8007579.1IMPORTIN-7, 8, 11
CAI8007580.1IMPORTIN-7, 8, 11
CAI8007581.1IMPORTIN-7, 8, 11
CAI8007582.1IMPORTIN-7, 8, 11
CAI8007584.1PHYTANOYL-COA ALPHA-HYDROXYLASE
CAI8007583.1PHYTANOYL-COA ALPHA-HYDROXYLASE
CAI8007585.1PHYTANOYL-COA ALPHA-HYDROXYLASE
CAI8007587.1NUDIX T16 FAMILY MEMBER
CAI8007586.1NUDIX T16 FAMILY MEMBER
CAI8007588.1UNCHARACTERIZED
CAI8007589.1UNCHARACTERIZED
CAI8007590.1NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-B SUBUNIT
CAI8007591.1COILED-COIL DOMAIN-CONTAINING PROTEIN 57
CAI8007592.1RAS-RELATED PROTEIN RAB
CAI8007594.1ROUND SPERMATID BASIC PROTEIN 1
CAI8007593.1MIP04163P
CAI8007595.1
CAI8007597.1DEDICATOR OF CYTOKINESIS
CAI8007599.1DEDICATOR OF CYTOKINESIS
CAI8007598.1DEDICATOR OF CYTOKINESIS
CAI8007596.1DEDICATOR OF CYTOKINESIS
CAI8007600.1DEDICATOR OF CYTOKINESIS
CAI8007601.1DEDICATOR OF CYTOKINESIS
CAI8007602.1KELCH PROTEIN
CAI8007603.1
CAI8007604.1
CAI8007605.1
CAI8007606.1
CAI8007607.1SERINE HYDROXYMETHYLTRANSFERASE
CAI8007608.1
CAI8007610.1PEPTIDE METHIONINE SULFOXIDE REDUCTASE
CAI8007609.1PEPTIDE METHIONINE SULFOXIDE REDUCTASE
CAI8007611.1
CAI8007612.1VACUOLAR ATP SYNTHASE SUBUNIT S1
CAI8007614.1SULFATE TRANSPORTER
CAI8007613.1SULFATE TRANSPORTER
CAI8007615.1PADR-FAMILY TRANSCRIPTIONAL REGULATOR
CAI8007616.1DEGV DOMAIN-CONTAINING PROTEIN DR_1986-RELATED
CAI8007617.1
CAI8007618.1CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN
CAI8007619.1SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM
CAI8007620.1SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM
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