Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8007621.1 | |
| CAI8007622.1 | |
| CAI8007625.1 | MYELOID LEUKEMIA FACTOR |
| CAI8007624.1 | MYELOID LEUKEMIA FACTOR |
| CAI8007623.1 | |
| CAI8007626.1 | MYELOID LEUKEMIA FACTOR |
| CAI8007627.1 | |
| CAI8007628.1 | |
| CAI8007629.1 | |
| CAI8007630.1 | 3'-5' EXONUCLEASE ERI1-RELATED |
| CAI8007631.1 | NIPSNAP-RELATED |
| CAI8007633.1 | |
| CAI8007632.1 | |
| CAI8007635.1 | PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 |
| CAI8007637.1 | PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 |
| CAI8007634.1 | PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 |
| CAI8007636.1 | PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 |
| CAI8007638.1 | PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 |
| CAI8007639.1 | PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 |
| CAI8007641.1 | PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 |
| CAI8007640.1 | PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 |
| CAI8007642.1 | PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 |
| CAI8007647.1 | PORCUPINE |
| CAI8007646.1 | PORCUPINE |
| CAI8007645.1 | PORCUPINE |
| CAI8007644.1 | PORCUPINE |
| CAI8007643.1 | PORCUPINE |
| CAI8007648.1 | PORCUPINE |
| CAI8007649.1 | PORCUPINE |
| CAI8007650.1 | SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1 |
| CAI8007652.1 | G PROTEIN-COUPLED RECEPTOR 157-RELATED |
| CAI8007651.1 | G PROTEIN-COUPLED RECEPTOR 157-RELATED |
| CAI8007653.1 | G PROTEIN-COUPLED RECEPTOR 157-RELATED |
| CAI8007654.1 | G PROTEIN-COUPLED RECEPTOR 157-RELATED |
| CAI8007655.1 | SCP160 |
| CAI8007658.1 | SCP160 |
| CAI8007657.1 | SCP160 |
| CAI8007656.1 | SCP160 |
| CAI8007659.1 | |
| CAI8007660.1 | |
| CAI8007661.1 | |
| CAI8007662.1 | FUMARYLACETOACETATE HYDROLASE DOMAIN-CONTAINING PROTEIN 2A-RELATED |
| CAI8007663.1 | |
| CAI8007664.1 | D-GALACTONATE DEHYDRATASE-RELATED |
| CAI8007665.1 | 4-HYDROXY-4-METHYL-2-OXOGLUTARATE ALDOLASE 3-RELATED |
| CAI8007666.1 | UPF0173 METAL-DEPENDENT HYDROLASE MJ1163-RELATED |
| CAI8007667.1 | ATP-BINDING CASSETTE SUB-FAMILY B |
| CAI8007668.1 | ATP-BINDING CASSETTE SUB-FAMILY B |
| CAI8007669.1 | SLR2084 PROTEIN-RELATED |
| CAI8007670.1 | PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1 |
