About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50%31,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

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Gene IDDescription
CAI8007671.1PHOSPHOENOLPYRUVATE DIKINASE-RELATED
CAI8007672.1RNA POLYMERASE SIGMA FACTOR RPO
CAI8007673.1RNA POLYMERASE SIGMA FACTOR RPO
CAI8007679.1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
CAI8007678.1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
CAI8007677.1
CAI8007676.1
CAI8007675.1
CAI8007674.1
CAI8007680.1
CAI8007681.1
CAI8007682.1
CAI8007685.1
CAI8007684.1
CAI8007683.1
CAI8007686.1
CAI8007688.1
CAI8007687.1
CAI8007690.1
CAI8007689.1
CAI8007691.1
CAI8007695.1
CAI8007693.1
CAI8007692.1
CAI8007694.1
CAI8007696.1
CAI8007697.1
CAI8007700.1INTERFERON/INTERLEUKIN RECEPTOR
CAI8007699.1
CAI8007698.1INTERFERON/INTERLEUKIN RECEPTOR
CAI8007701.1
CAI8007702.1
CAI8007703.1
CAI8007704.1
CAI8007705.1
CAI8007706.1
CAI8007707.1
CAI8007711.1
CAI8007712.1
CAI8007714.1
CAI8007713.1
CAI8007710.1
CAI8007709.1
CAI8007708.1
CAI8007715.1
CAI8007716.1JITTERBUG, ISOFORM N
CAI8007717.1HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
CAI8007718.1GLYCOGENIN SUBFAMILY MEMBER
CAI8007719.1GLYCOGENIN SUBFAMILY MEMBER
CAI8007720.1GLYCOGENIN SUBFAMILY MEMBER
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