About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_28956-1.15CELL CYCLE CHECKPOINT PROTEIN RAD17
Bpl_scaf_28956-1.16ALPHA-GLUCOSIDASE
Bpl_scaf_28956-3.1
Bpl_scaf_28956-3.8
Bpl_scaf_28956-4.13
Bpl_scaf_28956-4.14
Bpl_scaf_28956-4.15
Bpl_scaf_28956-4.7
Bpl_scaf_2896-0.13TIMEOUT/TIMELESS-2
Bpl_scaf_2896-0.15C5ORF31
Bpl_scaf_28963-0.0
Bpl_scaf_28963-0.2
Bpl_scaf_28972-0.3G DOMAIN-CONTAINING PROTEIN
Bpl_scaf_28978-0.17PLEXIN
Bpl_scaf_28990-1.11
Bpl_scaf_28990-1.13SEC14 RELATED PROTEIN
Bpl_scaf_28990-1.14
Bpl_scaf_28990-1.8
Bpl_scaf_28990-1.9
Bpl_scaf_28990-2.3OPSIN
Bpl_scaf_28990-3.5SPHINGOMYELIN PHOSPHODIESTERASE
Bpl_scaf_28990-4.0
Bpl_scaf_28990-4.3THIOREDOXIN
Bpl_scaf_28990-4.5
Bpl_scaf_28990-4.7
Bpl_scaf_28998-0.3SERINE HYDROLASE RBBP9
Bpl_scaf_28998-0.5
Bpl_scaf_290-0.7
Bpl_scaf_290-0.8INHIBITOR OF APOPTOSIS
Bpl_scaf_29004-0.3
Bpl_scaf_29016-0.11CEREBELLIN-RELATED
Bpl_scaf_29016-0.5BEIGE/BEACH-RELATED
Bpl_scaf_29016-0.6CEREBELLIN-RELATED
Bpl_scaf_29032-0.10MUCIN 4-RELATED
Bpl_scaf_29032-0.11EGF-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_29032-0.12
Bpl_scaf_29032-0.9MUCIN 4-RELATED
Bpl_scaf_2904-1.11PHOSPHATE TRANSPORTER
Bpl_scaf_2904-1.12PHOSPHATE TRANSPORTER
Bpl_scaf_2904-1.13TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9
Bpl_scaf_29041-0.21
Bpl_scaf_29041-0.22
Bpl_scaf_29041-0.24ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_29063-0.6
Bpl_scaf_29069-0.14UNCHARACTERIZED
Bpl_scaf_29069-0.17
Bpl_scaf_29069-0.19CONTACTIN 5
Bpl_scaf_29069-0.20
Bpl_scaf_29069-0.26
Bpl_scaf_29079-0.2UNCHARACTERIZED
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