About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_28783-2.44GLUTATHIONE S-TRANSFERASE-RELATED
Bpl_scaf_2883-0.1LIPOMA HMGIC FUSION PARTNER-LIKE PROTEIN
Bpl_scaf_2883-0.5HISTIDINE TRIAD HIT PROTEIN
Bpl_scaf_2883-0.7LIPOMA HMGIC FUSION PARTNER-LIKE PROTEIN
Bpl_scaf_2884-0.10
Bpl_scaf_2884-0.12CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER
Bpl_scaf_2884-0.5AGAP008170-PA
Bpl_scaf_2884-1.11RAD, GEM/KIR FAMILY MEMBER 2, ISOFORM C
Bpl_scaf_2884-1.6
Bpl_scaf_2884-1.7TROPONIN C-AKIN-1 PROTEIN
Bpl_scaf_2884-3.7RAD, GEM/KIR FAMILY MEMBER 2, ISOFORM C
Bpl_scaf_2884-5.4RAD, GEM/KIR FAMILY MEMBER 2, ISOFORM C
Bpl_scaf_2884-6.13RAD, GEM/KIR FAMILY MEMBER 2, ISOFORM C
Bpl_scaf_2884-6.14RAD, GEM/KIR FAMILY MEMBER 2, ISOFORM C
Bpl_scaf_2885-0.15
Bpl_scaf_2885-0.19RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Bpl_scaf_2885-0.20
Bpl_scaf_2885-0.21PROTEIN CBG10425
Bpl_scaf_2885-0.23
Bpl_scaf_28859-0.6GLUTARYL-COA DEHYDROGENASE, MITOCHONDRIAL
Bpl_scaf_28859-0.7TRANSMEMBRANE PROTEIN 214
Bpl_scaf_28859-0.8RGS-GAIP INTERACTING PROTEIN GIPC
Bpl_scaf_28859-0.9PHENYLALANYL-TRNA SYNTHETASE
Bpl_scaf_28860-0.0
Bpl_scaf_28860-0.14AGAP005574-PA
Bpl_scaf_28860-0.17REPLICATION FACTOR A 1, RFA1
Bpl_scaf_28860-0.4
Bpl_scaf_28860-0.8
Bpl_scaf_28861-0.3BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED
Bpl_scaf_28862-0.0MOLYBDOPTERIN SYNTHASE RELATED
Bpl_scaf_28862-1.0
Bpl_scaf_28862-1.4UNCHARACTERIZED
Bpl_scaf_28862-1.5LONG-CHAIN-FATTY-ACID--COA LIGASE
Bpl_scaf_28862-10.10
Bpl_scaf_28862-10.11LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATED
Bpl_scaf_28862-10.9RUVB-RELATED REPTIN AND PONTIN
Bpl_scaf_28862-11.15UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Bpl_scaf_28862-11.16UNCHARACTERIZED PROTEIN KIAA2013
Bpl_scaf_28862-11.17BARDET-BIEDL SYNDROME 2 PROTEIN
Bpl_scaf_28862-11.18F20B24.22
Bpl_scaf_28862-2.0
Bpl_scaf_28862-2.18
Bpl_scaf_28862-2.20
Bpl_scaf_28862-2.22
Bpl_scaf_28862-2.23
Bpl_scaf_28862-2.24
Bpl_scaf_28862-2.8
Bpl_scaf_28862-2.9
Bpl_scaf_28862-6.8UNCHARACTERIZED
Bpl_scaf_28862-6.9PROTEIN UNC-13 HOMOLOG
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