About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_28563-0.15
Bpl_scaf_28563-0.16
Bpl_scaf_28563-0.17
Bpl_scaf_28563-0.3
Bpl_scaf_28570-0.0
Bpl_scaf_28580-0.0
Bpl_scaf_28580-0.7
Bpl_scaf_28593-0.10ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED
Bpl_scaf_28593-0.13FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_28593-0.15
Bpl_scaf_28593-0.16
Bpl_scaf_28599-0.10NONSYNDROMIC HEARING IMPAIRMENT PROTEIN
Bpl_scaf_28599-0.15TETRASPANIN
Bpl_scaf_28599-0.16
Bpl_scaf_28599-0.17
Bpl_scaf_28608-0.11
Bpl_scaf_28608-0.15
Bpl_scaf_28609-0.0
Bpl_scaf_28609-0.2FAS APOPTOTIC INHIBITORY MOLECULE FAIM
Bpl_scaf_28609-0.4SCAVENGER RECEPTOR CLASS F
Bpl_scaf_28609-4.0SOLUTE CARRIER FAMILY 34 SODIUM PHOSPHATE , MEMBER 2-RELATED
Bpl_scaf_28609-4.28
Bpl_scaf_28609-4.32
Bpl_scaf_28609-4.33
Bpl_scaf_28609-4.34
Bpl_scaf_28609-4.36
Bpl_scaf_28609-4.37
Bpl_scaf_28609-4.39
Bpl_scaf_28609-4.40
Bpl_scaf_28609-4.41
Bpl_scaf_28609-4.43OS10G0105400 PROTEIN
Bpl_scaf_28609-4.44OS10G0105400 PROTEIN
Bpl_scaf_28609-4.45
Bpl_scaf_28609-4.46OS10G0105400 PROTEIN
Bpl_scaf_28609-4.47
Bpl_scaf_28609-4.48CRUMBS FAMILY MEMBER
Bpl_scaf_28609-5.7UBX DOMAIN-CONTAINING PROTEIN 1
Bpl_scaf_28609-5.8POLY [ADP-RIBOSE] POLYMERASE
Bpl_scaf_28609-5.9CELL DIVISION CYCLE-ASSOCIATED PROTEIN 3
Bpl_scaf_28609-6.11PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P
Bpl_scaf_28609-6.25POLY [ADP-RIBOSE] POLYMERASE
Bpl_scaf_28609-6.26NEPHROCYSTIN-4
Bpl_scaf_28609-6.27
Bpl_scaf_28612-0.0
Bpl_scaf_28612-0.5
Bpl_scaf_28621-0.0
Bpl_scaf_28621-0.3
Bpl_scaf_28621-0.6
Bpl_scaf_28621-0.7
Bpl_scaf_28622-0.7
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