About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_28734-1.49TYROSINE-PROTEIN KINASE
Bpl_scaf_28734-1.52ZINC FINGER PROTEIN
Bpl_scaf_2874-0.10
Bpl_scaf_2874-0.2TRANSPOSABLE ELEMENT-RELATED
Bpl_scaf_2874-0.3
Bpl_scaf_2874-0.9
Bpl_scaf_28742-0.2ZGC:174356
Bpl_scaf_28744-1.12GABA-B RECEPTOR
Bpl_scaf_28744-1.16
Bpl_scaf_28744-1.17
Bpl_scaf_28744-2.0B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Bpl_scaf_28744-2.8INHIBITOR OF GROWTH PROTEIN
Bpl_scaf_28746-0.0
Bpl_scaf_28748-0.1
Bpl_scaf_28751-0.0
Bpl_scaf_28757-0.0
Bpl_scaf_28761-0.0
Bpl_scaf_28762-1.21
Bpl_scaf_28762-2.14JITTERBUG, ISOFORM N
Bpl_scaf_28762-2.24BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT 6
Bpl_scaf_28762-2.25
Bpl_scaf_28762-2.26BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA
Bpl_scaf_28762-2.5BETA-AMYLOID BINDING PROTEIN-RELATED
Bpl_scaf_28762-2.6METALLOPROTEASE TLDD
Bpl_scaf_28769-0.0LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
Bpl_scaf_28771-0.0
Bpl_scaf_28772-0.1NEUROPEPTIDE Y RECEPTOR
Bpl_scaf_28772-0.5
Bpl_scaf_28772-0.8
Bpl_scaf_28772-1.10
Bpl_scaf_28772-1.9
Bpl_scaf_28772-2.10
Bpl_scaf_28772-2.13NEUROLIGIN
Bpl_scaf_28772-2.2
Bpl_scaf_28772-2.25
Bpl_scaf_28775-0.0
Bpl_scaf_28775-0.5
Bpl_scaf_28781-0.2
Bpl_scaf_28783-0.6LEUCYL-TRNA SYNTHETASE
Bpl_scaf_28783-1.4RHO FAMILY GTPASE
Bpl_scaf_28783-1.42RHO FAMILY GTPASE
Bpl_scaf_28783-1.9RHO FAMILY GTPASE
Bpl_scaf_28783-2.13ADP-RIBOSYLATION-LIKE FACTOR 6-INTERACTING PROTEIN
Bpl_scaf_28783-2.14AMINE OXIDASE
Bpl_scaf_28783-2.16RHO FAMILY GTPASE
Bpl_scaf_28783-2.37RHO FAMILY GTPASE
Bpl_scaf_28783-2.38RHO FAMILY GTPASE
Bpl_scaf_28783-2.40RHO FAMILY GTPASE
Bpl_scaf_28783-2.41RHO FAMILY GTPASE
Bpl_scaf_28783-2.43ACYL CARRIER PROTEIN
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