Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8007072.1 | SERINE/THREONINE PROTEIN PHOSPHATASE |
| CAI8007071.1 | SERINE/THREONINE PROTEIN PHOSPHATASE |
| CAI8007076.1 | CULLIN AND GALACTOSE-BINDING DOMAIN-CONTAINING |
| CAI8007075.1 | CULLIN AND GALACTOSE-BINDING DOMAIN-CONTAINING |
| CAI8007074.1 | CULLIN AND GALACTOSE-BINDING DOMAIN-CONTAINING |
| CAI8007073.1 | CULLIN AND GALACTOSE-BINDING DOMAIN-CONTAINING |
| CAI8007079.1 | CULLIN AND GALACTOSE-BINDING DOMAIN-CONTAINING |
| CAI8007078.1 | CULLIN AND GALACTOSE-BINDING DOMAIN-CONTAINING |
| CAI8007077.1 | CULLIN AND GALACTOSE-BINDING DOMAIN-CONTAINING |
| CAI8007080.1 | CATION CHANNEL SPERM-ASSOCIATED PROTEIN 1 |
| CAI8007085.1 | NUCLEOTIDE KINASE |
| CAI8007086.1 | PROTEIN YEEZ |
| CAI8007084.1 | NUCLEOTIDE KINASE |
| CAI8007083.1 | NUCLEOTIDE KINASE |
| CAI8007082.1 | NUCLEOTIDE KINASE |
| CAI8007081.1 | |
| CAI8007087.1 | NUCLEOTIDE KINASE |
| CAI8007088.1 | |
| CAI8007089.1 | TANDEM PH DOMAIN CONTAINING PROTEIN |
| CAI8007090.1 | LEUCINE-RICH REPEAT-CONTAINING |
| CAI8007091.1 | |
| CAI8007092.1 | |
| CAI8007093.1 | TRANSMEMBRANE 9 SUPERFAMILY PROTEIN |
| CAI8007094.1 | |
| CAI8007095.1 | NICKEL INSERTION PROTEIN-RELATED |
| CAI8007096.1 | ELONGATION FACTOR TU-RELATED |
| CAI8007099.1 | ELONGATION FACTOR TU-RELATED |
| CAI8007097.1 | ELONGATION FACTOR TU-RELATED |
| CAI8007098.1 | ELONGATION FACTOR TU-RELATED |
| CAI8007100.1 | ELONGATION FACTOR TU-RELATED |
| CAI8007101.1 | ELONGATION FACTOR TU-RELATED |
| CAI8007102.1 | ELONGATION FACTOR TU-RELATED |
| CAI8007103.1 | RHO-INTERACTING TRANSCRIPTION TERMINATION FACTOR NUSG |
| CAI8007104.1 | 54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL |
| CAI8007105.1 | |
| CAI8007106.1 | |
| CAI8007109.1 | 39S RIBOSOMAL PROTEIN L12 |
| CAI8007108.1 | 39S RIBOSOMAL PROTEIN L12 |
| CAI8007107.1 | 39S RIBOSOMAL PROTEIN L12 |
| CAI8007110.1 | |
| CAI8007111.1 | |
| CAI8007112.1 | DNA REPAIR PROTEIN RADC |
| CAI8007113.1 | |
| CAI8007114.1 | |
| CAI8007115.1 | DELTA-AMINOLEVULINIC ACID DEHYDRATASE |
| CAI8007120.1 | SIROHEME SYNTHASE-RELATED |
| CAI8007119.1 | SIROHEME SYNTHASE-RELATED |
| CAI8007118.1 | SIROHEME SYNTHASE-RELATED |
| CAI8007117.1 | SIROHEME SYNTHASE-RELATED |
| CAI8007116.1 | SIROHEME SYNTHASE-RELATED |
