Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8007020.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8007023.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8007022.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8007025.1 | UBIQUITIN-CONJUGATING ENZYME E2 |
| CAI8007024.1 | UBIQUITIN-CONJUGATING ENZYME E2 |
| CAI8007026.1 | VESICLE PROTEIN SORTING-ASSOCIATED |
| CAI8007027.1 | SERINE/THREONINE-PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT B |
| CAI8007032.1 | GRIP AND COILED-COIL DOMAIN-CONTAINING PROTEIN 1 |
| CAI8007031.1 | GRIP AND COILED-COIL DOMAIN-CONTAINING PROTEIN 1 |
| CAI8007030.1 | GRIP AND COILED-COIL DOMAIN-CONTAINING PROTEIN 1 |
| CAI8007029.1 | GRIP AND COILED-COIL DOMAIN-CONTAINING PROTEIN 1 |
| CAI8007028.1 | GRIP AND COILED-COIL DOMAIN-CONTAINING PROTEIN 1 |
| CAI8007033.1 | |
| CAI8007034.1 | |
| CAI8007035.1 | |
| CAI8007036.1 | |
| CAI8007037.1 | |
| CAI8007038.1 | |
| CAI8007039.1 | |
| CAI8007041.1 | MUCOLIPIN |
| CAI8007040.1 | MUCOLIPIN |
| CAI8007042.1 | MUCOLIPIN |
| CAI8007043.1 | MUCOLIPIN |
| CAI8007045.1 | MUCOLIPIN |
| CAI8007046.1 | MUCOLIPIN |
| CAI8007044.1 | MUCOLIPIN |
| CAI8007047.1 | |
| CAI8007048.1 | |
| CAI8007051.1 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| CAI8007050.1 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| CAI8007049.1 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| CAI8007052.1 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| CAI8007053.1 | SIGNAL PEPTIDE, CUB AND EGF-LIKE DOMAIN-CONTAINING |
| CAI8007054.1 | PA14 DOMAIN-CONTAINING PROTEIN |
| CAI8007055.1 | |
| CAI8007056.1 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| CAI8007057.1 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| CAI8007063.1 | SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B |
| CAI8007062.1 | SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B |
| CAI8007060.1 | |
| CAI8007061.1 | SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B |
| CAI8007058.1 | SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B |
| CAI8007059.1 | SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B |
| CAI8007068.1 | NOTCH LIGAND FAMILY MEMBER |
| CAI8007067.1 | NOTCH LIGAND FAMILY MEMBER |
| CAI8007066.1 | |
| CAI8007065.1 | |
| CAI8007064.1 | |
| CAI8007069.1 | |
| CAI8007070.1 | ZGC:174356 |
