Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8006971.1 | |
| CAI8006972.1 | |
| CAI8006973.1 | |
| CAI8006974.1 | |
| CAI8006975.1 | |
| CAI8006976.1 | |
| CAI8006977.1 | DYNEIN REGULATORY COMPLEX PROTEIN 8 |
| CAI8006981.1 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN U FAMILY MEMBER |
| CAI8006982.1 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN U FAMILY MEMBER |
| CAI8006983.1 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN U FAMILY MEMBER |
| CAI8006980.1 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN U FAMILY MEMBER |
| CAI8006979.1 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN U FAMILY MEMBER |
| CAI8006978.1 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN U FAMILY MEMBER |
| CAI8006985.1 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN U FAMILY MEMBER |
| CAI8006984.1 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN U FAMILY MEMBER |
| CAI8006986.1 | UNCHARACTERIZED |
| CAI8006987.1 | UNCHARACTERIZED |
| CAI8006988.1 | UNCHARACTERIZED |
| CAI8006989.1 | UNCHARACTERIZED |
| CAI8006991.1 | SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED |
| CAI8006990.1 | SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED |
| CAI8006992.1 | SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED |
| CAI8006993.1 | SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED |
| CAI8006994.1 | SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED |
| CAI8006995.1 | |
| CAI8006996.1 | |
| CAI8006998.1 | |
| CAI8006997.1 | POLYCOMB GROUP PROTEIN |
| CAI8006999.1 | |
| CAI8007002.1 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
| CAI8007003.1 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
| CAI8007001.1 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
| CAI8007000.1 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
| CAI8007004.1 | ATPASES OF THE PP SUPERFAMILY-RELATED |
| CAI8007005.1 | ATPASES OF THE PP SUPERFAMILY-RELATED |
| CAI8007006.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8007007.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8007009.1 | |
| CAI8007008.1 | COATOMER |
| CAI8007010.1 | |
| CAI8007011.1 | DNA REPAIR PROTEIN SWI5 HOMOLOG |
| CAI8007012.1 | |
| CAI8007013.1 | |
| CAI8007014.1 | BREAST CANCER ANTI-ESTROGEN RESISTANCE PROTEIN 3 HOMOLOG-LIKE PROTEIN |
| CAI8007015.1 | BREAST CANCER ANTI-ESTROGEN RESISTANCE PROTEIN 3 HOMOLOG-LIKE PROTEIN |
| CAI8007017.1 | CASEIN KINASE II SUBUNIT BETA |
| CAI8007016.1 | CASEIN KINASE II SUBUNIT BETA |
| CAI8007018.1 | DNA POLYMERASE EPSILON SUBUNIT 3 |
| CAI8007019.1 | |
| CAI8007021.1 | TNF RECEPTOR ASSOCIATED FACTOR |
