Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8006821.1 | |
| CAI8006822.1 | |
| CAI8006823.1 | |
| CAI8006825.1 | |
| CAI8006824.1 | |
| CAI8006828.1 | |
| CAI8006827.1 | |
| CAI8006826.1 | |
| CAI8006830.1 | |
| CAI8006829.1 | |
| CAI8006831.1 | |
| CAI8006832.1 | FLAVIN REDUCTASE |
| CAI8006833.1 | DNA GYRASE/TOPOISOMERASE SUBUNIT A |
| CAI8006834.1 | LEUCINE ZIPPER TRANSCRIPTION FACTOR LIKE |
| CAI8006836.1 | FAS APOPTOTIC INHIBITORY MOLECULE FAIM |
| CAI8006835.1 | FAS APOPTOTIC INHIBITORY MOLECULE FAIM |
| CAI8006837.1 | FAS APOPTOTIC INHIBITORY MOLECULE FAIM |
| CAI8006838.1 | FAS APOPTOTIC INHIBITORY MOLECULE FAIM |
| CAI8006839.1 | FAS APOPTOTIC INHIBITORY MOLECULE FAIM |
| CAI8006840.1 | HEME TRANSPORTER HRG1 |
| CAI8006841.1 | |
| CAI8006843.1 | CXC2 DOMAIN-CONTAINING PROTEIN |
| CAI8006842.1 | CXC2 DOMAIN-CONTAINING PROTEIN |
| CAI8006844.1 | CXC2 DOMAIN-CONTAINING PROTEIN |
| CAI8006845.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8006846.1 | TRANSPOSON |
| CAI8006847.1 | |
| CAI8006848.1 | |
| CAI8006849.1 | |
| CAI8006850.1 | |
| CAI8006851.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8006852.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8006853.1 | |
| CAI8006854.1 | |
| CAI8006858.1 | CYTOSOLIC CARBOXYPEPTIDASE |
| CAI8006857.1 | CYTOSOLIC CARBOXYPEPTIDASE |
| CAI8006855.1 | CYTOSOLIC CARBOXYPEPTIDASE |
| CAI8006856.1 | CYTOSOLIC CARBOXYPEPTIDASE |
| CAI8006860.1 | TRANSMEMBRANE PROTEIN |
| CAI8006859.1 | NADH-UBIQUINONE OXIDOREDUCTASE B22 SUBUNIT |
| CAI8006861.1 | NADH-UBIQUINONE OXIDOREDUCTASE PDSW SUBUNIT |
| CAI8006862.1 | |
| CAI8006863.1 | CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE |
| CAI8006864.1 | |
| CAI8006865.1 | |
| CAI8006866.1 | PEPTIDYLPROLYL ISOMERASE |
| CAI8006868.1 | TENASCIN |
| CAI8006867.1 | |
| CAI8006869.1 | |
| CAI8006870.1 | MOLTING PROTEIN MLT-4 |
