Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8006771.1 | |
| CAI8006775.1 | NCK-ASSOCIATED PROTEIN 1 |
| CAI8006774.1 | NCK-ASSOCIATED PROTEIN 1 |
| CAI8006773.1 | NCK-ASSOCIATED PROTEIN 1 |
| CAI8006772.1 | NCK-ASSOCIATED PROTEIN 1 |
| CAI8006776.1 | NCK-ASSOCIATED PROTEIN 1 |
| CAI8006777.1 | |
| CAI8006778.1 | D-XYLOSE-PROTON SYMPORTER-LIKE 2 |
| CAI8006779.1 | - |
| CAI8006780.1 | - |
| CAI8006783.1 | ZINC/IRON TRANSPORTER |
| CAI8006782.1 | ZINC/IRON TRANSPORTER |
| CAI8006781.1 | ZINC/IRON TRANSPORTER |
| CAI8006784.1 | ZINC/IRON TRANSPORTER |
| CAI8006785.1 | ZINC/IRON TRANSPORTER |
| CAI8006786.1 | AQUAPORIN TRANSPORTER |
| CAI8006787.1 | ARGININE BIOSYNTHESIS BIFUNCTIONAL PROTEIN ARGJ |
| CAI8006788.1 | N-ACETYLGLUTAMATE SYNTHASE |
| CAI8006789.1 | N-ACETYLGLUTAMATE SYNTHASE |
| CAI8006791.1 | N-ACETYLGLUTAMATE SYNTHASE |
| CAI8006790.1 | N-ACETYLGLUTAMATE SYNTHASE |
| CAI8006793.1 | N-ACETYLGLUTAMATE SYNTHASE |
| CAI8006792.1 | N-ACETYLGLUTAMATE SYNTHASE |
| CAI8006794.1 | AMINOTRANSFERASE CLASS III |
| CAI8006795.1 | AMINOTRANSFERASE CLASS III |
| CAI8006796.1 | ANTITOXIN HICB |
| CAI8006797.1 | ANTITOXIN HICB |
| CAI8006798.1 | ARGININOSUCCINATE SYNTHASE |
| CAI8006799.1 | ASPARTATE AMINOTRANSFERASE |
| CAI8006800.1 | |
| CAI8006801.1 | ZINC UPTAKE REGULATION PROTEIN |
| CAI8006802.1 | GLYOXALASE-RELATED |
| CAI8006803.1 | S-ADENOSYLMETHIONINE:TRNA RIBOSYLTRANSFERASE-ISOMERASE |
| CAI8006804.1 | C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED |
| CAI8006805.1 | COBYRINATE A,C-DIAMIDE SYNTHASE |
| CAI8006807.1 | COBYRINATE A,C-DIAMIDE SYNTHASE |
| CAI8006806.1 | COBYRINATE A,C-DIAMIDE SYNTHASE |
| CAI8006808.1 | COBYRINATE A,C-DIAMIDE SYNTHASE |
| CAI8006809.1 | CORRINOID ADENOSYLTRANSFERASE |
| CAI8006810.1 | FAD-BINDING, PUTATIVE (AFU_ORTHOLOGUE AFUA_6G07600)-RELATED |
| CAI8006811.1 | METALLOPROTEASE |
| CAI8006815.1 | |
| CAI8006816.1 | |
| CAI8006814.1 | |
| CAI8006813.1 | |
| CAI8006812.1 | |
| CAI8006817.1 | |
| CAI8006820.1 | |
| CAI8006819.1 | |
| CAI8006818.1 |
