About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides03875TRANSPOSON
Paelopatides03876EPM2A-INTERACTING PROTEIN 1
Paelopatides03877RAS-ASSOCIATING DOMAIN CONTAINING PROTEIN
Paelopatides03878REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides03879-
Paelopatides03880DOUBLECORTIN DOMAIN-CONTAINING PROTEIN 1
Paelopatides03881REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides03882REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides03883-
Paelopatides03884SI:CH211-108C17.2-RELATED-RELATED
Paelopatides03885ZGC:195170
Paelopatides03886MYOTUBULARIN-RELATED
Paelopatides03887-
Paelopatides03888G_PROTEIN_RECEP_F1_2 DOMAIN-CONTAINING PROTEIN
Paelopatides03889DENN DOMAIN-CONTAINING PROTEIN 4
Paelopatides03890TRANSPOSON
Paelopatides03892FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides03893-
Paelopatides03894-
Paelopatides03896-
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