About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides0379152 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides037925'-NUCLEOTIDASE-RELATED
Paelopatides037935'-NUCLEOTIDASE-RELATED
Paelopatides037945'-NUCLEOTIDASE-RELATED
Paelopatides03795-
Paelopatides03796HEPARAN SULFATE SULFOTRANSFERASE
Paelopatides03797SERINE/THREONINE-PROTEIN KINASE
Paelopatides03798DUAL SPECIFICITY PROTEIN KINASE
Paelopatides03799-
Paelopatides03800BONUS, ISOFORM C-RELATED
Paelopatides03803ENDONUCLEASE-RELATED
Paelopatides03804-
Paelopatides03806ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
Paelopatides03807UNCHARACTERIZED
Paelopatides03808-
Paelopatides03809-
Paelopatides03810PROTEIN CBG26694
Paelopatides03811PROTEIN CBG26694
Paelopatides03812-
Paelopatides03813-
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