About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides03814SI:CH211-196P9.1-RELATED
Paelopatides03815FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides03816-
Paelopatides03817-
Paelopatides03818ENZYMATIC POLYPROTEIN-RELATED
Paelopatides03819POL PROTEIN
Paelopatides03820ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides03821POL PROTEIN
Paelopatides03822SWAP-70 RECOMBINASE
Paelopatides03823DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2
Paelopatides03824CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A
Paelopatides03825BUCENTAUR RELATED
Paelopatides03826CALCIUM-INDEPENDENT PHOSPHOLIPASE A2 IPLA2 -RELATED
Paelopatides03827PARANEOPLASTIC ANTIGEN
Paelopatides03828PROTEIN CBG26694
Paelopatides03829EXPRESSED PROTEIN
Paelopatides03830ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
Paelopatides03832PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides03833-
Paelopatides03834UNCHARACTERIZED
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