About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides03771UNCHARACTERIZED
Paelopatides03772-
Paelopatides03773ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides03774COILED-COIL DOMAIN-CONTAINING PROTEIN 171
Paelopatides03775-
Paelopatides03776-
Paelopatides03777HYPOXIA-INDUCIBLE FACTOR 1 ALPHA
Paelopatides03778WNT RELATED
Paelopatides03779MITOCHONDRIAL INNER MEMBRANE PROTEASE
Paelopatides03780L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides03781-
Paelopatides03782SERINE-THREONINE PROTEIN KINASE
Paelopatides03783RETROTRANSPOSON GAG-LIKE PROTEIN 9
Paelopatides03784TYROSINE-PROTEIN KINASE
Paelopatides03785BAX INHIBITOR-RELATED
Paelopatides03786-
Paelopatides03787-
Paelopatides03788FUCOSE-1-PHOSPHATE GUANYLYLTRANSFERASE
Paelopatides03789REVERSE TRANSCRIPTASES
Paelopatides03790-
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