About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides03751-
Paelopatides03752-
Paelopatides03753REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides03754TRANSIENT RECEPTOR POTENTIAL CHANNEL
Paelopatides03755COILED-COIL DOMAIN-CONTAINING PROTEIN 60
Paelopatides03756-
Paelopatides03757ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides03758REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides03759CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides03760CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides03761-
Paelopatides03762CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides03763-
Paelopatides03764-
Paelopatides03765MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides03766MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides03767NEUROTRANSMITTER GATED ION CHANNEL
Paelopatides03768AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Paelopatides03769LD44032P
Paelopatides03770UBIQUILIN
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