About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides03665FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides03666-
Paelopatides03667TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides03668SYS1
Paelopatides03669-
Paelopatides03670-
Paelopatides03671ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides03672POL PROTEIN
Paelopatides03673P53 INDUCED PROTEIN
Paelopatides03674ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides03675SYNAPTIC ADHESION-LIKE MOLECULE SALM
Paelopatides03676-
Paelopatides03677-
Paelopatides03678ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
Paelopatides03679ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
Paelopatides03680-
Paelopatides03681-
Paelopatides03682-
Paelopatides03683-
Paelopatides03684-
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