About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides03599PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides03600-
Paelopatides03601PROTEIN CBG26694
Paelopatides03602-
Paelopatides03603KRAB DOMAIN C2H2 ZINC FINGER
Paelopatides03604-
Paelopatides03605-
Paelopatides03606-
Paelopatides03607-
Paelopatides03608-
Paelopatides03609-
Paelopatides03610BONUS, ISOFORM C-RELATED
Paelopatides03611REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides03612REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides03613REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides03614REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides03615REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides03616-
Paelopatides03617-
Paelopatides03618REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATED
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