About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides03514ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
Paelopatides03515ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
Paelopatides03516PROTEIN CBG26694
Paelopatides03517ADDITIONAL SEX COMBS LIKE PROTEIN ASXL
Paelopatides03518TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides03519TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides03520REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides03521REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides03522COILED-COIL DOMAIN-CONTAINING PROTEIN 178
Paelopatides03523COILED-COIL DOMAIN-CONTAINING PROTEIN 178
Paelopatides03524COILED-COIL DOMAIN-CONTAINING PROTEIN 178
Paelopatides03525EPM2A-INTERACTING PROTEIN 1
Paelopatides03526COILED-COIL DOMAIN-CONTAINING PROTEIN 178
Paelopatides03527-
Paelopatides03528PRE-MRNA-SPLICING FACTOR CWF18
Paelopatides03530THIOSULFATE SULFERTANSFERASE
Paelopatides03531RAS-RELATED GTP BINDING RAG/GTR YEAST
Paelopatides03532ATP-DEPENDENT DNA HELICASE
Paelopatides03533ATP-DEPENDENT DNA HELICASE
Paelopatides03534REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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