About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides03383GAG-RELATED PROTEIN
Paelopatides03385SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION
Paelopatides03386-
Paelopatides03387-
Paelopatides03388PROTEIN DISULFIDE-ISOMERASE C17H9.14C-RELATED
Paelopatides03389-
Paelopatides03390PROTEIN DISULFIDE-ISOMERASE C17H9.14C-RELATED
Paelopatides03391FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides03392SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides03393FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides03395-
Paelopatides03396HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides03397-
Paelopatides03398-
Paelopatides03399-
Paelopatides03400PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides03402PROTEIN CBG26694
Paelopatides03403-
Paelopatides03404-
Paelopatides03405IP13529P
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