About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides03343PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides03344UNCHARACTERIZED
Paelopatides03345NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides03346REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides03347REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides03348PROTEIN CBG26694
Paelopatides03349FI04643P-RELATED
Paelopatides03350REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides03351TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides03352ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides03353-
Paelopatides03354REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides03355TUMOR PROTEIN D52
Paelopatides03356PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides03357-
Paelopatides03358-
Paelopatides03359-
Paelopatides03360-
Paelopatides03361UNCHARACTERIZED
Paelopatides03362PROTEIN CBG26694
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