About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides03406SI:CH211-196P9.1-RELATED
Paelopatides03407-
Paelopatides03408-
Paelopatides03409-
Paelopatides03410BUCENTAUR RELATED
Paelopatides03411REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides03412REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides03413-
Paelopatides03414UNCHARACTERIZED
Paelopatides03415TYROSINE AMINOTRANSFERASE
Paelopatides03416-
Paelopatides03417NXPE FAMILY MEMBER
Paelopatides03418HISTONE DEACETYLASE 9-RELATED
Paelopatides03419HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED
Paelopatides03420HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides03421-
Paelopatides03422RNA BINDING PROTEIN
Paelopatides03423-
Paelopatides03424-
Paelopatides03425HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
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