About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides03493SIALATE O-ACETYLESTERASE
Paelopatides03494TRANSFERRIN
Paelopatides0349560S RIBOSOMAL PROTEIN L31
Paelopatides03496COMM DOMAIN-CONTAINING PROTEIN 4-8 FAMILY MEMBER
Paelopatides03497-
Paelopatides03498REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides03500REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides03501PROTEIN ZERKNUELLT 1-RELATED
Paelopatides03502-
Paelopatides03503ENZYMATIC POLYPROTEIN-RELATED
Paelopatides03504-
Paelopatides03505ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides03506ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides03507PROTEIN CBG26694
Paelopatides03508APOPTOSIS-INDUCING FACTOR 1
Paelopatides03509FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides03510PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides03511SPINAL CORD EXPRESSION PROTEIN 4
Paelopatides03512PROTEIN CBG16427
Paelopatides03513EPOXIDE HYDROLASE
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