About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides03897PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides03898-
Paelopatides03899TRANSPOSASE, PUTATIVE-RELATED
Paelopatides03902-
Paelopatides03903SI:CH211-196P9.1-RELATED
Paelopatides03904-
Paelopatides03905PAPILLOMAVIRUS REGULATORY FACTOR PRF-1
Paelopatides03906REVERSE TRANSCRIPTASES
Paelopatides03907REGULATING SYNAPTIC MEMBRANE EXOCYTOSIS PROTEIN
Paelopatides03908REGULATING SYNAPTIC MEMBRANE EXOCYTOSIS PROTEIN
Paelopatides03909-
Paelopatides03910UPSTREAM BINDING TRANSCRIPTION FACTOR
Paelopatides03911RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides03912BUCENTAUR RELATED
Paelopatides03913SLR5058 PROTEIN
Paelopatides03914-
Paelopatides03915-
Paelopatides03916PROTEIN CBG26694
Paelopatides03917TRANSCRIPTIONAL ACTIVATOR CUBITUS INTERRUPTUS
Paelopatides03918-
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