About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides03919-
Paelopatides03920CILIA AND FLAGELLA-ASSOCIATED PROTEIN 58-RELATED
Paelopatides03921CILIA AND FLAGELLA-ASSOCIATED PROTEIN 58-RELATED
Paelopatides03922BIORIENTATION OF CHROMOSOMES IN CELL DIVISION 1 FAMILY MEMBER
Paelopatides03923COILED COIL DOMAIN-CONTAINING PROTEIN 8, CCDC8
Paelopatides03924-
Paelopatides03925SUPPRESSOR OF FUSED
Paelopatides03926ACTIN
Paelopatides03927MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE
Paelopatides03928MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE
Paelopatides03929EPM2A-INTERACTING PROTEIN 1
Paelopatides03930RHO FAMILY GTPASE
Paelopatides03931SPECKLE-TYPE POZ PROTEIN
Paelopatides03932TRANSMEMBRANE PROTEIN 128
Paelopatides0393330S RIBOSOMAL PROTEIN S18
Paelopatides03934GH3 DOMAIN-CONTAINING PROTEIN
Paelopatides03935PEPTIDASE
Paelopatides03936-
Paelopatides03937REVERSE TRANSCRIPTASES
Paelopatides03938-
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