Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8006319.1 | DPY-19-LIKE 1, LIKE (H. SAPIENS) |
| CAI8006323.1 | DPY-19-LIKE 1, LIKE (H. SAPIENS) |
| CAI8006322.1 | DPY-19-LIKE 1, LIKE (H. SAPIENS) |
| CAI8006321.1 | DPY-19-LIKE 1, LIKE (H. SAPIENS) |
| CAI8006325.1 | DPY-19-LIKE 1, LIKE (H. SAPIENS) |
| CAI8006326.1 | DPY-19-LIKE 1, LIKE (H. SAPIENS) |
| CAI8006327.1 | DPY-19-LIKE 1, LIKE (H. SAPIENS) |
| CAI8006328.1 | DPY-19-LIKE 1, LIKE (H. SAPIENS) |
| CAI8006329.1 | UNCHARACTERIZED |
| CAI8006331.1 | CYSTEINYL-TRNA SYNTHETASE |
| CAI8006335.1 | CYSTEINYL-TRNA SYNTHETASE |
| CAI8006332.1 | CYSTEINYL-TRNA SYNTHETASE |
| CAI8006333.1 | CYSTEINYL-TRNA SYNTHETASE |
| CAI8006336.1 | CYSTEINYL-TRNA SYNTHETASE |
| CAI8006334.1 | CYSTEINYL-TRNA SYNTHETASE |
| CAI8006330.1 | MORN REPEAT-CONTAINING PROTEIN 4 |
| CAI8006337.1 | METALLOPHOSPHOESTERASE |
| CAI8006338.1 | RUVB-RELATED REPTIN AND PONTIN |
| CAI8006340.1 | PHOSPHOTYROSINE INTERACTION DOMAIN-CONTAINING FAMILY MEMBER |
| CAI8006339.1 | |
| CAI8006341.1 | TETRASPANIN |
| CAI8006342.1 | TETRASPANIN |
| CAI8006344.1 | BUD13 HOMOLOG |
| CAI8006343.1 | |
| CAI8006345.1 | BUD13 HOMOLOG |
| CAI8006346.1 | |
| CAI8006347.1 | |
| CAI8006348.1 | |
| CAI8006349.1 | |
| CAI8006350.1 | |
| CAI8006351.1 | |
| CAI8006352.1 | |
| CAI8006353.1 | SERINE/THREONINE-PROTEIN KINASE PLK |
| CAI8006354.1 | MOLYBDOPTERIN BIOSYNTHESIS PROTEIN |
| CAI8006355.1 | MOLYBDOPTERIN BIOSYNTHESIS PROTEIN |
| CAI8006356.1 | CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED |
| CAI8006357.1 | |
| CAI8006358.1 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| CAI8006361.1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
| CAI8006360.1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
| CAI8006359.1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
| CAI8006362.1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
| CAI8006363.1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
| CAI8006364.1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
| CAI8006365.1 | |
| CAI8006366.1 | |
| CAI8006367.1 | 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE |
| CAI8006368.1 | |
| CAI8006369.1 | |
| CAI8006370.1 | TRANSKETOLASE |
