About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50%31,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

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Gene IDDescription
CAI8006221.1
CAI8006222.1
CAI8006223.1
CAI8006224.1
CAI8006225.1
CAI8006226.1
CAI8006227.1
CAI8006228.1-
CAI8006229.1-
CAI8006235.1
CAI8006233.1
CAI8006234.1
CAI8006236.1
CAI8006237.1
CAI8006231.1ALTERNATIVE OXIDASE
CAI8006230.1ALTERNATIVE OXIDASE
CAI8006232.1ALTERNATIVE OXIDASE
CAI8006238.1COLLAGEN ALPHA
CAI8006239.1COLLAGEN ALPHA
CAI8006241.1GLYCOSYLTRANSFERASE-RELATED
CAI8006240.1GLYCOSYLTRANSFERASE-RELATED
CAI8006242.1COLLAGEN ALPHA
CAI8006248.1ORIGIN RECOGNITION COMPLEX SUBUNIT 5
CAI8006249.1ORIGIN RECOGNITION COMPLEX SUBUNIT 5
CAI8006251.1ORIGIN RECOGNITION COMPLEX SUBUNIT 5
CAI8006250.1ORIGIN RECOGNITION COMPLEX SUBUNIT 5
CAI8006247.1ORIGIN RECOGNITION COMPLEX SUBUNIT 5
CAI8006246.1ORIGIN RECOGNITION COMPLEX SUBUNIT 5
CAI8006245.1ORIGIN RECOGNITION COMPLEX SUBUNIT 5
CAI8006244.1ORIGIN RECOGNITION COMPLEX SUBUNIT 5
CAI8006243.1ORIGIN RECOGNITION COMPLEX SUBUNIT 5
CAI8006252.1ORIGIN RECOGNITION COMPLEX SUBUNIT 5
CAI8006253.1ORIGIN RECOGNITION COMPLEX SUBUNIT 5
CAI8006254.1
CAI8006258.1
CAI8006259.1
CAI8006257.1
CAI8006256.1
CAI8006255.1
CAI8006260.1
CAI8006261.1FATTY ACID DESATURASE 2
CAI8006262.1
CAI8006263.1
CAI8006264.1
CAI8006266.1
CAI8006265.1
CAI8006267.1
CAI8006272.1
CAI8006271.1
CAI8006270.1
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