Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8006075.1 | SERINE/THREONINE-PROTEIN KINASE NEK |
| CAI8006074.1 | SERINE/THREONINE-PROTEIN KINASE NEK |
| CAI8006073.1 | TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN |
| CAI8006072.1 | TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN |
| CAI8006071.1 | TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN |
| CAI8006070.1 | TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN |
| CAI8006069.1 | TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN |
| CAI8006078.1 | SERINE/THREONINE-PROTEIN KINASE NEK |
| CAI8006079.1 | OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED |
| CAI8006082.1 | TRANSDUCIN BETA-LIKE 3 |
| CAI8006081.1 | TRANSDUCIN BETA-LIKE 3 |
| CAI8006080.1 | TRANSDUCIN BETA-LIKE 3 |
| CAI8006084.1 | TRANSDUCIN BETA-LIKE 3 |
| CAI8006083.1 | TRANSDUCIN BETA-LIKE 3 |
| CAI8006085.1 | TRANSDUCIN BETA-LIKE 3 |
| CAI8006086.1 | TRANSDUCIN BETA-LIKE 3 |
| CAI8006087.1 | TRANSDUCIN BETA-LIKE 3 |
| CAI8006088.1 | |
| CAI8006089.1 | GLUTAMINYL-PEPTIDE CYCLOTRANSFERASE |
| CAI8006090.1 | GLUTAMINYL-PEPTIDE CYCLOTRANSFERASE |
| CAI8006092.1 | GTP CYCLOHYDROLASE I |
| CAI8006093.1 | GTP CYCLOHYDROLASE I |
| CAI8006091.1 | GTP CYCLOHYDROLASE I |
| CAI8006094.1 | GTP CYCLOHYDROLASE I |
| CAI8006095.1 | |
| CAI8006096.1 | DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING |
| CAI8006097.1 | PROPERDIN |
| CAI8006098.1 | |
| CAI8006099.1 | |
| CAI8006106.1 | DYNEIN HEAVY CHAIN |
| CAI8006107.1 | DYNEIN HEAVY CHAIN |
| CAI8006105.1 | DYNEIN HEAVY CHAIN |
| CAI8006103.1 | DYNEIN HEAVY CHAIN |
| CAI8006104.1 | DYNEIN HEAVY CHAIN |
| CAI8006101.1 | DYNEIN HEAVY CHAIN |
| CAI8006100.1 | DYNEIN HEAVY CHAIN |
| CAI8006108.1 | DYNEIN HEAVY CHAIN |
| CAI8006109.1 | DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN |
| CAI8006102.1 | DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN |
| CAI8006110.1 | |
| CAI8006111.1 | |
| CAI8006112.1 | RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT |
| CAI8006113.1 | MIP11318P |
| CAI8006114.1 | UNCHARACTERIZED |
| CAI8006118.1 | |
| CAI8006117.1 | |
| CAI8006116.1 | |
| CAI8006115.1 | |
| CAI8006121.1 | EQUILIBRATIVE NUCLEOSIDE TRANSPORTER |
| CAI8006120.1 | EQUILIBRATIVE NUCLEOSIDE TRANSPORTER |
