Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8005770.1 | - |
| CAI8005772.1 | - |
| CAI8005773.1 | |
| CAI8005777.1 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2 |
| CAI8005775.1 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2 |
| CAI8005776.1 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2 |
| CAI8005774.1 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2 |
| CAI8005779.1 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2 |
| CAI8005778.1 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2 |
| CAI8005780.1 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2 |
| CAI8005781.1 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2 |
| CAI8005782.1 | |
| CAI8005783.1 | |
| CAI8005784.1 | BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEIN BRCA1 |
| CAI8005785.1 | SERINE-THREONINE PROTEIN KINASE |
| CAI8005786.1 | LD33804P |
| CAI8005787.1 | ADP RIBOSYLATION FACTOR-RELATED |
| CAI8005788.1 | |
| CAI8005789.1 | |
| CAI8005791.1 | OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN |
| CAI8005790.1 | 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED |
| CAI8005792.1 | 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED |
| CAI8005794.1 | |
| CAI8005793.1 | |
| CAI8005795.1 | |
| CAI8005796.1 | |
| CAI8005797.1 | |
| CAI8005799.1 | |
| CAI8005798.1 | |
| CAI8005800.1 | |
| CAI8005801.1 | TUBULIN |
| CAI8005802.1 | GRANULIN |
| CAI8005803.1 | TRAF AND TNF RECEPTOR-ASSOCIATED PROTEIN |
| CAI8005804.1 | TRAF AND TNF RECEPTOR-ASSOCIATED PROTEIN |
| CAI8005805.1 | |
| CAI8005806.1 | MYOSIN |
| CAI8005807.1 | CATECHOL-2,3-DIOXYGENASE |
| CAI8005808.1 | L-ASPARTATE OXIDASE |
| CAI8005809.1 | L-ASPARTATE OXIDASE |
| CAI8005810.1 | |
| CAI8005811.1 | |
| CAI8005815.1 | GLYCEROL-3-PHOSPHATE DEHYDROGENASE |
| CAI8005814.1 | GLYCEROL-3-PHOSPHATE DEHYDROGENASE |
| CAI8005813.1 | GLYCEROL-3-PHOSPHATE DEHYDROGENASE |
| CAI8005812.1 | GLYCEROL-3-PHOSPHATE DEHYDROGENASE |
| CAI8005816.1 | EPOXIDE HYDROLASE 1-RELATED |
| CAI8005817.1 | COPROPORPHYRINIGEN III OXIDASE |
| CAI8005818.1 | |
| CAI8005819.1 | SLL0198 PROTEIN-RELATED |
| CAI8005820.1 |
