Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8005719.1 | |
| CAI8005722.1 | |
| CAI8005723.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8005724.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8005725.1 | LD44762P |
| CAI8005726.1 | CYTOKINE RECEPTOR |
| CAI8005727.1 | CYTOKINE RECEPTOR |
| CAI8005728.1 | CYTOKINE RECEPTOR |
| CAI8005734.1 | L-THREONINE 3-DEHYDROGENASE |
| CAI8005732.1 | L-THREONINE 3-DEHYDROGENASE |
| CAI8005733.1 | L-THREONINE 3-DEHYDROGENASE |
| CAI8005731.1 | L-THREONINE 3-DEHYDROGENASE |
| CAI8005730.1 | L-THREONINE 3-DEHYDROGENASE |
| CAI8005729.1 | L-THREONINE 3-DEHYDROGENASE |
| CAI8005735.1 | L-THREONINE 3-DEHYDROGENASE |
| CAI8005736.1 | |
| CAI8005737.1 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN |
| CAI8005740.1 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN |
| CAI8005739.1 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN |
| CAI8005738.1 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN |
| CAI8005741.1 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN |
| CAI8005742.1 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN |
| CAI8005743.1 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN |
| CAI8005744.1 | |
| CAI8005745.1 | |
| CAI8005746.1 | |
| CAI8005747.1 | |
| CAI8005748.1 | ANKYRIN REPEAT CONTAINING |
| CAI8005750.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8005749.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8005752.1 | REGULATOR OF CHROMOSOME CONDENSATION |
| CAI8005753.1 | REGULATOR OF CHROMOSOME CONDENSATION |
| CAI8005751.1 | UBIQUITIN-PROTEIN LIGASE E3A-RELATED |
| CAI8005754.1 | |
| CAI8005755.1 | |
| CAI8005756.1 | |
| CAI8005762.1 | |
| CAI8005761.1 | |
| CAI8005760.1 | |
| CAI8005759.1 | |
| CAI8005758.1 | |
| CAI8005757.1 | |
| CAI8005764.1 | SERINE-THREONINE PROTEIN KINASE |
| CAI8005763.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8005766.1 | |
| CAI8005767.1 | |
| CAI8005765.1 | |
| CAI8005768.1 | |
| CAI8005769.1 | |
| CAI8005771.1 | - |
