Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8005421.1 | ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2 |
| CAI8005423.1 | - |
| CAI8005422.1 | - |
| CAI8005424.1 | |
| CAI8005425.1 | PEPTIDASE S49 |
| CAI8005426.1 | |
| CAI8005427.1 | |
| CAI8005428.1 | BLR7761 PROTEIN |
| CAI8005431.1 | MULTIFUNCTIONAL TRYPTOPHAN BIOSYNTHESIS PROTEIN-RELATED |
| CAI8005430.1 | MULTIFUNCTIONAL TRYPTOPHAN BIOSYNTHESIS PROTEIN-RELATED |
| CAI8005429.1 | MULTIFUNCTIONAL TRYPTOPHAN BIOSYNTHESIS PROTEIN-RELATED |
| CAI8005432.1 | AMINOBENZOATE/ANTHRANILATE SYNTHASE |
| CAI8005433.1 | |
| CAI8005434.1 | ANTITOXIN HICB |
| CAI8005435.1 | |
| CAI8005436.1 | L-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIAL |
| CAI8005437.1 | ADENYLOSUCCINATE SYNTHETASE |
| CAI8005438.1 | OXIDOREDUCTASE CATD-RELATED |
| CAI8005439.1 | |
| CAI8005440.1 | |
| CAI8005441.1 | ALCOHOL DEHYDROGENASE |
| CAI8005442.1 | ELONGATION FACTOR TU-RELATED |
| CAI8005443.1 | |
| CAI8005444.1 | NICOTINAMIDE-NUCLEOTIDE AMIDOHYDROLASE PNCC |
| CAI8005445.1 | CORRINOID ADENOSYLTRANSFERASE |
| CAI8005446.1 | IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE SUBUNIT HISH |
| CAI8005447.1 | 1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] IMIDAZOLE-4-CARBOXAMIDE ISOMERASE |
| CAI8005448.1 | |
| CAI8005449.1 | SPERMIDINE N(1)-ACETYLTRANSFERASE |
| CAI8005450.1 | DIADENOSINE 5,5-P1,P4-TETRAPHOSPHATE PYROPHOSPHOHYDROLASE MUTT |
| CAI8005451.1 | ALKANESULFONATE MONOOXYGENASE |
| CAI8005452.1 | NUCLEOSIDE-DIPHOSPHATE-SUGAR EPIMERASE |
| CAI8005453.1 | |
| CAI8005454.1 | SARCOSINE DEHYDROGENASE-RELATED |
| CAI8005455.1 | |
| CAI8005456.1 | GAMMA-GLUTAMYLTRANSPEPTIDASE (AFU_ORTHOLOGUE AFUA_4G13580) |
| CAI8005457.1 | UNCHARACTERIZED |
| CAI8005458.1 | |
| CAI8005459.1 | IRON-SULFUR CLUSTER ASSEMBLY 2 HOMOLOG, MITOCHONDRIAL |
| CAI8005460.1 | LUCIFERASE-LIKE MONOOXYGENASE |
| CAI8005461.1 | |
| CAI8005462.1 | CHOLINE MONOOXYGENASE, CHLOROPLASTIC |
| CAI8005463.1 | BLR3401 PROTEIN |
| CAI8005464.1 | NUCLEOTIDYLTRANSFERASE |
| CAI8005465.1 | |
| CAI8005466.1 | |
| CAI8005467.1 | ANTITOXIN HICB |
| CAI8005468.1 | |
| CAI8005469.1 | |
| CAI8005470.1 | ALKANESULFONATE MONOOXYGENASE |
