Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8005271.1 | |
| CAI8005272.1 | |
| CAI8005275.1 | UDP-GLUCOSE GLYCOPROTEIN:GLUCOSYLTRANSFERASE |
| CAI8005277.1 | UDP-GLUCOSE GLYCOPROTEIN:GLUCOSYLTRANSFERASE |
| CAI8005276.1 | UDP-GLUCOSE GLYCOPROTEIN:GLUCOSYLTRANSFERASE |
| CAI8005273.1 | UDP-GLUCOSE GLYCOPROTEIN:GLUCOSYLTRANSFERASE |
| CAI8005274.1 | UDP-GLUCOSE GLYCOPROTEIN:GLUCOSYLTRANSFERASE |
| CAI8005278.1 | UDP-GLUCOSE GLYCOPROTEIN:GLUCOSYLTRANSFERASE |
| CAI8005282.1 | PROTEIN DCD1B |
| CAI8005281.1 | PROTEIN DCD1B |
| CAI8005280.1 | PROTEIN DCD1B |
| CAI8005279.1 | TF-1 CELL APOPTOSIS RELATED PROTEIN-15 |
| CAI8005283.1 | PROTEIN DCD1B |
| CAI8005284.1 | PROTEIN DCD1B |
| CAI8005287.1 | |
| CAI8005288.1 | |
| CAI8005285.1 | |
| CAI8005289.1 | |
| CAI8005286.1 | |
| CAI8005290.1 | |
| CAI8005291.1 | |
| CAI8005296.1 | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED |
| CAI8005297.1 | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED |
| CAI8005292.1 | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED |
| CAI8005293.1 | |
| CAI8005294.1 | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED |
| CAI8005295.1 | |
| CAI8005299.1 | |
| CAI8005298.1 | TRANSPOSON |
| CAI8005300.1 | TRANSPOSON |
| CAI8005301.1 | |
| CAI8005302.1 | ATP-DEPENDENT DNA HELICASE |
| CAI8005303.1 | |
| CAI8005304.1 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| CAI8005305.1 | |
| CAI8005306.1 | |
| CAI8005307.1 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 47 |
| CAI8005308.1 | |
| CAI8005309.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| CAI8005310.1 | |
| CAI8005311.1 | |
| CAI8005312.1 | COBYRINATE A,C-DIAMIDE SYNTHASE |
| CAI8005313.1 | COBYRINATE A,C-DIAMIDE SYNTHASE |
| CAI8005314.1 | CORRINOID ADENOSYLTRANSFERASE |
| CAI8005315.1 | CORRINOID ADENOSYLTRANSFERASE |
| CAI8005316.1 | FAD-BINDING, PUTATIVE (AFU_ORTHOLOGUE AFUA_6G07600)-RELATED |
| CAI8005317.1 | NARDILYSIN |
| CAI8005318.1 | METALLOPROTEASE |
| CAI8005320.1 | EXOSOME COMPLEX COMPONENT |
| CAI8005319.1 | EXOSOME COMPLEX COMPONENT |
